RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 AKR1C2P52895 323 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 PIGPP57054 158 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 TAS2R19P59542 299 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 HAGHQ16775 308 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 SCGB2B2Q4G0G5 96 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 Q56UQ5 140 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 BTNL8Q6UX41 500 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 CADM3Q8N126 398 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 ZNF486Q96H40 463 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 TMEM14BQ9NUH8 114 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 C21orf62Q9NYP8 219 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 MTFP1Q9UDX5 166 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 SCAF4O95104 1147 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 CD7P09564 240 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 TM4SF20Q53R12 229 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 UNQ9165/PRO28630Q6UXU0 137 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 RBPMS2Q6ZRY4 209 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 TMEM61Q8N0U2 210 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 CCDC71LQ8N9Z2 235 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 OR52B4Q8NGK2 314 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 RNASE11Q8TAA1 199 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 MARC2Q969Z3 335 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 BSCL2Q96G97 398 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 SRD5A3Q9H8P0 318 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 COPZ2Q9P299 210 aa14.98□□□□□ -0.01
SHROOM1-204ENST00000440118 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 OR11H12B2RN74 326 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 ATG12O94817 140 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 TRIM16LQ309B1 348 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 SPSB3Q6PJ21 355 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 MISP3Q96FF7 219 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 SEC22AQ96IW7 307 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 ABHD1Q96SE0 405 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 C20orf24Q9BUV8 137 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 MLXQ9UH92 298 aa14.97□□□□□ -0.01
SHROOM1-204ENST00000440118 DBX1A6NMT0 343 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 RAB3DO95716 219 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 RND3P61587 244 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 MRPS10P82664 201 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 SPCS2Q15005 226 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 ANKRD55Q3KP44 614 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 DEFB125Q8N687 156 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 OR1P1Q8NH06 330 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 ZFAND1Q8TCF1 268 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 SCARB1Q8WTV0 552 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 S100ZQ8WXG8 99 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 TMEM190Q8WZ59 177 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 CITED4Q96RK1 184 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 PDCD10Q9BUL8 212 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 WFDC10AQ9H1F0 79 aa14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 GAR1Q9NY12 217 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 MRPL27Q9P0M9 148 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-204ENST00000440118 GABARAPH6UMI1 98 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 LYL1P12980 280 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 MFAP2P55001 183 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 ELLP55199 621 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 ERHP84090 104 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 PRCDQ00LT1 54 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 IL18Q14116 193 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 STEAP1BQ6NZ63 245 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 LHFPL1Q86WI0 220 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 TMEM229BQ8NBD8 167 aa14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 DAZ1Q9NQZ3 744 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-204ENST00000440118 C3orf85A0A1B0GTC6 90 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 IGKV1-39P01597 117 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 IGKV1D-39P04432 117 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 MEF2DQ14814 521 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 SLC35G3Q8N808 338 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 OR4D10Q8NGI6 311 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 OR13C8Q8NGS7 320 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 PINX1Q96BK5 328 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 DIRAS2Q96HU8 199 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 ZNF436Q9C0F3 470 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 C6orf62Q9GZU0 229 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 MIXL1Q9H2W2 232 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 C14orf166Q9Y224 244 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 RYR3Q15413 4870 aa14.94□□□□□ -0.02
SHROOM1-204ENST00000440118 K7EIM0 57 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 NDUFA4O00483 81 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 CTDSP2O14595 271 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 NUPL2O15504 423 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 SSBP1Q04837 148 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 SPINK9Q5DT21 86 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 OR2C3Q8N628 320 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 TERB2Q8NHR7 220 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 TP53RKQ96S44 253 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 ATP6V0BQ99437 205 aa14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 CCDC59Q9P031 241 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-204ENST00000440118 IGHV3OR16-8A0A075B7F1 116 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 TRAV25A0A0B4J276 109 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 DISC1C4P0D8 188 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 IFNA17P01571 189 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 CD74P04233 296 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 SNCAP37840 140 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 HSPE1P61604 102 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 RELQ04864 619 aaPredicted RBP14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 IZUMO4Q1ZYL8 232 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 CASC10Q5T4H9 136 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 MARCH1Q8TCQ1 289 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 RRNAD1Q96FB5 475 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms