RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR51B2Q9Y5P1 312 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 U3KQA8 63 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TRBV9A0A0B4J1U6 114 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 CCL25O15444 150 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 GFRA3O60609 400 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 ADH4P08319 380 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TSPOP30536 169 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 ZNF718Q3SXZ3 478 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 ACP7Q6ZNF0 438 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TSKUQ8WUA8 353 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 COMMD5Q9GZQ3 224 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 PKDREJQ9NTG1 2253 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 CNOT1A5YKK6 2376 aaKnown RBP7.49□□□□□ -1.21
COPB1-202ENST00000439561 BMPR1BO00238 502 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 CHEK1O14757 476 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 NUDT3O95989 172 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 TDGF1P13385 188 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 ORM2P19652 201 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 TNFSF4P23510 183 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 PRRX1P54821 245 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 SELENOTP62341 195 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 RAB1CQ92928 201 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 V9GYV3 84 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 IGKV3D-15A0A087WSY6 115 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 SH2D7A6NKC9 451 aaPredicted RBP7.49□□□□□ -1.21
COPB1-202ENST00000439561 SLC25A5P05141 298 aaKnown RBP7.49□□□□□ -1.21
COPB1-202ENST00000439561 CD24P25063 80 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 LINC00310P59036 64 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 CX3CL1P78423 397 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 Q0VG73 95 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 OR9G1Q8NH87 305 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 BCL2L2Q92843 193 aaPredicted RBP7.49□□□□□ -1.21
COPB1-202ENST00000439561 ZNF835Q9Y2P0 537 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 FRYQ5TBA9 3013 aa7.49□□□□□ -1.21
COPB1-202ENST00000439561 TRGV10A0A0A0MS01 117 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 IGHV3-21A0A0B4J1V1 117 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 CEACAM8P31997 349 aaPredicted RBP7.48□□□□□ -1.21
COPB1-202ENST00000439561 REG1BP48304 166 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 KLF3P57682 345 aaPredicted RBP7.48□□□□□ -1.21
COPB1-202ENST00000439561 BRWD1-AS2P59051 145 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 HSPE1P61604 102 aaKnown RBP7.48□□□□□ -1.21
COPB1-202ENST00000439561 LDLRAD2Q5SZI1 272 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 Q6ZR03 302 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 C19orf35Q6ZS72 473 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 SAP30LQ9HAJ7 183 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 KLF13Q9Y2Y9 288 aaPredicted RBP7.48□□□□□ -1.21
COPB1-202ENST00000439561 AMMECR1Q9Y4X0 333 aaPredicted RBP7.48□□□□□ -1.21
COPB1-202ENST00000439561 COL4A2P08572 1712 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 CYC1P08574 325 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 PYYP10082 97 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 SLAQ13239 276 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 GABRA6Q16445 453 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 OR4C46A6NHA9 309 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 C10orf142B7Z368 130 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 LINC00869P0C866 280 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 UQCRFS1P47985 274 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 COX19Q49B96 90 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 ZNF841Q6ZN19 808 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 OR8B3Q8NGG8 313 aa7.48□□□□□ -1.21
COPB1-202ENST00000439561 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 A0A1W2PN81 502 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 LAMTOR5O43504 91 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 CRYABP02511 175 aaKnown RBP7.47□□□□□ -1.21
COPB1-202ENST00000439561 CA7P43166 264 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 GNG5P63218 68 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 ATP1A1-AS1Q5TC04 95 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 WDR82Q6UXN9 313 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 TCF24Q7RTU0 167 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 LOXL4Q96JB6 756 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 TRAV9-2A0A087WT02 112 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 HIGD1CA8MV81 97 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 ENSAO43768 121 aaKnown RBP7.47□□□□□ -1.21
COPB1-202ENST00000439561 MORN2Q502X0 79 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 FAM168AQ92567 244 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 PGLYRP4Q96LB8 373 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 OR2V2Q96R30 315 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
COPB1-202ENST00000439561 AHRRA9YTQ3 701 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 C9JCJ5 164 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 C8orf88P0DMB2 117 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 ERVK11-1P61568 191 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 RTL8BQ17RB0 113 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 TMEM105Q8N8V8 129 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 PAXXQ9BUH6 204 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 SFXN3Q9BWM7 321 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 CALYQ9NYX4 217 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 SSUH2Q9Y2M2 353 aa7.46□□□□□ -1.21
COPB1-202ENST00000439561 EP300Q09472 2414 aaPredicted RBP7.46□□□□□ -1.21
COPB1-202ENST00000439561 GGTLC3B5MD39 225 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms