RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
TSC2-206ENST00000439117 C19orf54Q5BKX5 351 aa12.67□□□□□ -0.38
TSC2-206ENST00000439117 NHP2Q9NX24 153 aaKnown RBP12.67□□□□□ -0.38
TSC2-206ENST00000439117 CYSLTR1Q9Y271 337 aa12.67□□□□□ -0.38
TSC2-206ENST00000439117 THSD7BQ9C0I4 1608 aa12.67□□□□□ -0.38
TSC2-206ENST00000439117 OR10J6PQ8NGY7 276 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 KLK15Q9H2R5 256 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 DLX6P56179 175 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 HCP5Q6MZN7 132 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
TSC2-206ENST00000439117 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 CSRP1P21291 193 aaKnown RBP12.66□□□□□ -0.38
TSC2-206ENST00000439117 RSPO4Q2I0M5 234 aaPredicted RBP12.66□□□□□ -0.38
TSC2-206ENST00000439117 C18orf12Q96KH6 178 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 CYTL1Q9NRR1 136 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
TSC2-206ENST00000439117 NEUROG3Q9Y4Z2 214 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 UMODP07911 640 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 ORMDL3Q8N138 153 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 CACNA1DQ01668 2161 aa12.66□□□□□ -0.38
TSC2-206ENST00000439117 TFF3Q07654 80 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
TSC2-206ENST00000439117 TDGF1P3P51864 188 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 FOXL1Q12952 345 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 UNQ5815/PRO19632Q6UWF5 114 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 NPIPB3Q92617 1050 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 CALYQ9NYX4 217 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 GFRA1P56159 465 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 C1QL2Q7Z5L3 287 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 CHD5Q8TDI0 1954 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 PPP1R17O96001 155 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
TSC2-206ENST00000439117 RAB9AP51151 201 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 FOXC2Q99958 501 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 LPAR2Q9HBW0 351 aa12.65□□□□□ -0.38
TSC2-206ENST00000439117 APOMO95445 188 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 GPR6P46095 362 aaPredicted RBP12.64□□□□□ -0.39
TSC2-206ENST00000439117 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
TSC2-206ENST00000439117 OR9G4Q8NGQ1 327 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 ID3Q02535 119 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 GP6Q9HCN6 339 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 ARHGEF17Q96PE2 2063 aaPredicted RBP12.64□□□□□ -0.39
TSC2-206ENST00000439117 TEX38Q6PEX7 206 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
TSC2-206ENST00000439117 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
TSC2-206ENST00000439117 GPR82Q96P67 336 aa12.64□□□□□ -0.39
TSC2-206ENST00000439117 ADRA2AP08913 450 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 RABAC1Q9UI14 185 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 F2RL2O00254 374 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 CKS1BP61024 79 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 A8MWP6 167 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 MFAP4P55083 255 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 TPTE2P1Q5T6R2 138 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 LINC00305Q7Z4B0 112 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 FMC1Q96HJ9 113 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 ANKRD36A6QL64 1941 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 MTCL1Q9Y4B5 1905 aaKnown RBP12.63□□□□□ -0.39
TSC2-206ENST00000439117 CELA3AP09093 270 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 TMEM54Q969K7 222 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 C16orf92Q96LL3 132 aa12.63□□□□□ -0.39
TSC2-206ENST00000439117 LOC102723996A0A087X1L8 192 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 C9orf172C9J069 976 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 J3QRE1 110 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 RTTNQ86VV8 2226 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 IGKV3-7A0A075B6H7 116 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 NAPSAO96009 420 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 GZMBP10144 247 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 TSPOP30536 169 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 CIARTQ8N365 385 aaPredicted RBP12.62□□□□□ -0.39
TSC2-206ENST00000439117 CACNA1HO95180 2353 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 ZNF318Q5VUA4 2279 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 GCSAMLQ5JQS6 135 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 OR4C13Q8NGP0 309 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 IDI2-AS1Q9NZ38 188 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 HTN1P15515 57 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 CCL13Q99616 98 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
TSC2-206ENST00000439117 ANK1P16157 1881 aa12.61□□□□□ -0.39
TSC2-206ENST00000439117 Q6ZT83 130 aa12.61□□□□□ -0.39
TSC2-206ENST00000439117 METTL26Q96S19 204 aa12.61□□□□□ -0.39
TSC2-206ENST00000439117 NTN3O00634 580 aaPredicted RBP12.61□□□□□ -0.39
TSC2-206ENST00000439117 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
TSC2-206ENST00000439117 A8MWV9 139 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms