RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 OR5M1Q8NGP8 315 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR5AR1Q8NGP9 310 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10R2Q8NGX6 335 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR10Z1Q8NGY1 313 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR8U1Q8NH10 309 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR9G1Q8NH87 305 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF502Q8TBZ5 544 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB2BQ8WUD1 216 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SKA2Q8WVK7 121 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CYGBQ8WWM9 190 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GEMIN6Q8WXD5 167 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM234Q8WY98 164 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 PTH2Q96A98 100 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAMM41Q96BW9 452 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 PPCDCQ96CD2 204 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MUCL1Q96DR8 90 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MS4A6EQ96DS6 147 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SGTBQ96EQ0 304 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CNBD2Q96M20 576 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 Q96MT0 163 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MS4A4EQ96PG1 132 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2A5Q96R48 311 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 STACQ99469 402 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 PRRT1Q99946 306 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SH3GL3Q99963 347 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 COPS4Q9BT78 406 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDCA4Q9BXL8 241 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 YIPF3Q9GZM5 350 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 AICDAQ9GZX7 198 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 NXF2Q9GZY0 626 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SPNS1Q9H2V7 528 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51B5Q9H339 312 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SRMSQ9H3Y6 488 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ISYNA1Q9NPH2 558 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SIRT7Q9NRC8 400 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CTPS2Q9NRF8 586 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SDHAF2Q9NX18 166 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 PAQR5Q9NXK6 330 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SCN3BQ9NY72 215 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CALML5Q9NZT1 146 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 RSL24D1Q9UHA3 163 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 BOKQ9UMX3 212 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TPRKBQ9Y3C4 175 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GOLT1BQ9Y3E0 138 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 KLF12Q9Y4X4 402 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ORC6Q9Y5N6 252 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC22A7Q9Y694 548 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 KCNE3Q9Y6H6 103 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAV39A0A0B4J263 110 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A1W2PQL4 384 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 IRGMA1A4Y4 181 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ISPDA4D126 451 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TVP23AA6NH52 213 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR2AT4A6NND4 320 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SMKR1H3BMG3 65 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 K7EN84 100 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TNFRSF11BO00300 401 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SULT1C2O00338 296 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 HMGN4O00479 90 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAAHO00519 579 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PEX7O00628 323 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 FFAR1O14842 300 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC22A1O15245 554 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 FABP7O15540 132 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 FADS1O60427 444 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 TPST1O60507 370 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CTNSO60931 367 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GABARAPO95166 117 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 VAMP5O95183 116 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GPR75O95800 540 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 C1QCP02747 245 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 HMGN1P05114 100 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ISG15P05161 165 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGKV4-1P06312 121 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDK1P06493 297 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 IL3P08700 152 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GIPP09681 153 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 COX5BP10606 129 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CD36P16671 472 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 RPS4Y1P22090 263 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ELK4P28324 431 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PEBP1P30086 187 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PFN2P35080 140 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 HRH1P35367 487 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GPX4P36969 197 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 IFNGR2P38484 337 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ETV6P41212 452 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 GSSP48637 474 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 INSL3P51460 131 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF83P51522 516 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 SUB1P53999 127 aaKnown RBP eCLIP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CRISP3P54108 245 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CTBP2P56545 445 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF121P58317 390 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB8AP61006 207 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 UBE2KP61086 200 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 COPZ1P61923 177 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PSPHP78330 225 aa1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 PRR3P79522 188 aaKnown RBP1.31□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDK5Q00535 292 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms