RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TAS2R46P59540 309 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 EIF4EBP1Q13541 118 aaPredicted RBP5.8□□□□□ -1.48
VPS50-204ENST00000438395 DEFB135Q30KP9 77 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 Q56UQ5 140 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 SLC25A24Q6NUK1 477 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 SPSB3Q6PJ21 355 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 ZNF773Q6PK81 442 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 SPARTQ8N0X7 666 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 OR5AP2Q8NGF4 316 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 OR5H2Q8NGV7 314 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 TMEM190Q8WZ59 177 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 LSM10Q969L4 123 aaKnown RBP5.8□□□□□ -1.48
VPS50-204ENST00000438395 BSCL2Q96G97 398 aaPredicted RBP5.8□□□□□ -1.48
VPS50-204ENST00000438395 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 C5orf66Q9H5L9 145 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 AUNIPQ9H7T9 357 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 C21orf62Q9NYP8 219 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 TP53TG1Q9Y2A0 90 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 DMRT1Q9Y5R6 373 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 TRAV3A0A0B4J244 114 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 KIR2DL5BA0A0G2JN68 375 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 KIR2DL5BA0A0G2JPC4 375 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 A0A0J9YWU9 116 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 MEIS3P1A6NDR6 274 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 TSPAN4O14817 238 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 NUPL2O15504 423 aaKnown RBP5.79□□□□□ -1.48
VPS50-204ENST00000438395 YIF1AO95070 293 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 PTHLHP12272 177 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 BRWD1-AS2P59051 145 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 RELQ04864 619 aaPredicted RBP5.79□□□□□ -1.48
VPS50-204ENST00000438395 POU2AF1Q16633 256 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 TMEM69Q5SWH9 247 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 ZNF818PQ6ZRF7 136 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 Q6ZWC4 215 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 LYG2Q86SG7 212 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 CROCCP3Q8IVE0 287 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 KIR2DL5AQ8N109 375 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 OR10W1Q8NGF6 305 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 KIR2DL5BQ8NHK3 375 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 LINC00476Q8WZB0 136 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 SLC25A38Q96DW6 304 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 S100A16Q96FQ6 103 aaKnown RBP5.79□□□□□ -1.48
VPS50-204ENST00000438395 TMEM56Q96MV1 263 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 CMTM3Q96MX0 182 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 ATP6V0BQ99437 205 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 TSC22D3Q99576 134 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 YTHDF1Q9BYJ9 559 aaKnown RBP5.79□□□□□ -1.48
VPS50-204ENST00000438395 VCX3AQ9NNX9 186 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 FKBP11Q9NYL4 201 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 UBQLN2Q9UHD9 624 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 PRNDQ9UKY0 176 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 OR51B2Q9Y5P1 312 aa5.79□□□□□ -1.48
VPS50-204ENST00000438395 IGHV3-21A0A0B4J1V1 117 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 NDUFA4O00483 81 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 TMEM127O75204 238 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 KRASP01116 189 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 EIF4EP06730 217 aaKnown RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 SERPINE2P07093 398 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 CLEC2LP0C7M8 214 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 C8orf88P0DMB2 117 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 RPL35AP18077 110 aaKnown RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 F2RP25116 425 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 NEDD8Q15843 81 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 KLK9Q2XQG4 91 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 UBE2NLQ5JXB2 153 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 OR5H6Q8NGV6 325 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 OR6F1Q8NGZ6 308 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 OR5B3Q8NH48 314 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 GIMAP1Q8WWP7 306 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 DGCR14Q96DF8 476 aaKnown RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 ZNF2Q9BSG1 426 aaPredicted RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 ZNF436Q9C0F3 470 aaPredicted RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 KLK9Q9UKQ9 250 aa5.78□□□□□ -1.48
VPS50-204ENST00000438395 F11RQ9Y624 299 aaKnown RBP5.78□□□□□ -1.48
VPS50-204ENST00000438395 CSMD3Q7Z407 3707 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 IGHV3OR16-8A0A075B7F1 116 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 TEX50A0A1B0GTY4 177 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 CGB1A6NKQ9 187 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 GPR31O00270 319 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 XRCC3O43542 346 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 ZNF207O43670 478 aaKnown RBP5.77□□□□□ -1.49
VPS50-204ENST00000438395 G6PCP35575 357 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 LPAR6P43657 344 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
VPS50-204ENST00000438395 TSPAN5P62079 268 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 PAFAH1B2P68402 229 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 WT1-ASQ06250 92 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 CEMP1Q6PRD7 247 aaPredicted RBP5.77□□□□□ -1.49
VPS50-204ENST00000438395 H2BFWTQ7Z2G1 175 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 SAMD12Q8N8I0 201 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 OR4A16Q8NH70 328 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 MOB3AQ96BX8 217 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 GALNT14Q96FL9 552 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 GINS3Q9BRX5 216 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 NDUFA4L2Q9NRX3 87 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 NSG2Q9Y328 171 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 DNAH1Q9P2D7 4330 aa5.77□□□□□ -1.49
VPS50-204ENST00000438395 IGKV3-7A0A075B6H7 116 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms