RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RPH3ALQ9UNE2 315 aa13.71□□□□□ -0.21
TTC3-209ENST00000438055 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
TTC3-209ENST00000438055 SRRM4A7MD48 611 aaKnown RBP13.71□□□□□ -0.21
TTC3-209ENST00000438055 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
TTC3-209ENST00000438055 CRYABP02511 175 aaKnown RBP13.71□□□□□ -0.21
TTC3-209ENST00000438055 ADMP35318 185 aa13.71□□□□□ -0.21
TTC3-209ENST00000438055 CMTM2Q8TAZ6 248 aa13.71□□□□□ -0.21
TTC3-209ENST00000438055 FAM103A1Q9BTL3 118 aaKnown RBP13.71□□□□□ -0.21
TTC3-209ENST00000438055 TMEM14BQ9NUH8 114 aa13.71□□□□□ -0.21
TTC3-209ENST00000438055 TRGV8A0A0C4DH27 118 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 PRRG2O14669 202 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 OR5G3P0C626 314 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 CRISP2P16562 243 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 TAS2R45P59539 299 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 PAX5Q02548 391 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 CENPWQ5EE01 88 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 ZNF664Q8N3J9 261 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 DDB2Q92466 427 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 SAP30LQ9HAJ7 183 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 ELOVL5Q9NYP7 299 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 ANKRD11Q6UB99 2663 aaPredicted RBP13.71□□□□□ -0.22
TTC3-209ENST00000438055 CEP295Q9C0D2 2601 aa13.71□□□□□ -0.22
TTC3-209ENST00000438055 IGHV3-72A0A0B4J1Y9 119 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 CT45A6P0DMU7 189 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 CT45A5P0DMU8 189 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 CT45A7P0DMV0 189 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 GAL3ST2Q9H3Q3 398 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 UPK2O00526 184 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 PLAUP00749 431 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 CD99P14209 185 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 REC114Q7Z4M0 266 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 NAT8BQ9UHF3 227 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 MED13LQ71F56 2210 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 LHBP01229 141 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 GCGP01275 180 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 PRB3Q04118 309 aaPredicted RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 KIAA1644Q3SXP7 199 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 MMD2Q8IY49 270 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
TTC3-209ENST00000438055 OR5R1Q8NH85 324 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 OR2T6Q8NHC8 308 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
TTC3-209ENST00000438055 RPL19P84098 196 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 MRPL54Q6P161 138 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 FLYWCH2Q96CP2 140 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 MRPL18Q9H0U6 180 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 CCKARP32238 428 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 PRR27Q6MZM9 219 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 REG1AP05451 166 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 PRCDQ00LT1 54 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 FOXL1Q12952 345 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 LURAP1LQ8IV03 231 aa13.69□□□□□ -0.22
TTC3-209ENST00000438055 RBMXL3Q8N7X1 1067 aaKnown RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
TTC3-209ENST00000438055 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
TTC3-209ENST00000438055 IGLV3-9A0A075B6K5 115 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 TYMSP04818 313 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
TTC3-209ENST00000438055 ZNF788Q6ZQV5 615 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 ZNF714Q96N38 554 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 SFXN3Q9BWM7 321 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 TLN1Q9Y490 2541 aaKnown RBP13.68□□□□□ -0.22
TTC3-209ENST00000438055 RNF224P0DH78 156 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 TMEM144Q7Z5S9 345 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 IGHV3-21A0A0B4J1V1 117 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
TTC3-209ENST00000438055 TRAV5A0A0B4J249 113 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 NDUFB3O43676 98 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 LINC00869P0C866 280 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 ASPHD1Q5U4P2 390 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 VSTM5A8MXK1 200 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 K7EN84 100 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 NUPR1O60356 82 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
TTC3-209ENST00000438055 CGB3P0DN86 165 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 CGB7P0DN87 165 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 ZNF705AQ6ZN79 300 aaPredicted RBP13.66□□□□□ -0.22
TTC3-209ENST00000438055 PPIAL4EA0A075B759 164 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 PPIAL4FP0DN26 164 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 BSPH1Q075Z2 132 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 SLC25A48Q6ZT89 311 aaKnown RBP13.66□□□□□ -0.22
TTC3-209ENST00000438055 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms