RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SEMA5BQ9P283 1151 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 F8VVB4 439 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 F8VWA3 439 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 SP9P0CG40 484 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 XIRP1Q702N8 1843 aaKnown RBP9.84□□□□□ -0.83
PTCH1-209ENST00000437951 SCO2A0A1W2PP80 73 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 TEX45Q8NA69 505 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 KIAA1551Q9HCM1 1747 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 FOXI3A8MTJ6 420 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-209ENST00000437951 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 FOXL1Q12952 345 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 ICAM4Q14773 271 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 TMEM240Q5SV17 173 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 ZNF818PQ6ZRF7 136 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PF4P02776 101 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 MALP21145 153 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 CTGFP29279 349 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 CCL21O00585 134 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 CD5LO43866 347 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 DUX5Q96PT3 197 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 TGFAP01135 160 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
PTCH1-209ENST00000437951 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 LHX2P50458 406 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PRSS53Q2L4Q9 553 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 OCIAD2Q56VL3 154 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 ATXN7O15265 892 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PLAUP00749 431 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 TMEM258P61165 79 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 AHDC1Q5TGY3 1603 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-209ENST00000437951 C2CD4DB7Z1M9 353 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PATE4P0C8F1 98 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 IL11P20809 199 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 HCP5Q6MZN7 132 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 VN1R4Q7Z5H5 301 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 ARPC1AQ92747 370 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 IGHV3OR15-7A0A075B7D8 119 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 IGHV5-51A0A0C4DH38 117 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 SPINT1O43278 529 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 TRACP01848 142 aa9.83□□□□□ -0.84
PTCH1-209ENST00000437951 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 GAGE1Q13065 139 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 LAGE3Q14657 143 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-209ENST00000437951 VKORC1Q9BQB6 163 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 TM4SF5O14894 197 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 MOSP00540 346 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 TGIF1Q15583 401 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IGKV3-15P01624 115 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 ZP1P60852 638 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 UNQ5815/PRO19632Q6UWF5 114 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-209ENST00000437951 RAMP1O60894 148 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 UPK3AO75631 287 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 UCP2P55851 309 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 TM2D1Q9BX74 207 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 LRRK1Q38SD2 2015 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 FAM90A9PA6NNJ1 464 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 CD160O95971 181 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IFI27L1Q96BM0 104 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 PLA2G3Q9NZ20 509 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 TCF20Q9UGU0 1960 aaKnown RBP9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IGHV1OR21-1A0A087WYE8 117 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 CGAP01215 116 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IFITM1P13164 125 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 TDGF1P13385 188 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 IFI27L2Q9H2X8 130 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 DLL3Q9NYJ7 618 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 NEUROG3Q9Y4Z2 214 aa9.82□□□□□ -0.84
PTCH1-209ENST00000437951 NHSQ6T4R5 1651 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 DTX1Q86Y01 620 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 NCOR1O75376 2440 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 REG1BP48304 166 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 IGKV3D-11A0A0A0MRZ8 115 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 TMEM14DPA8MWL7 114 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 IGKV3-11P04433 115 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 ABHD17AQ96GS6 310 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 PIMREGQ9BSJ6 248 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 FGF16O43320 207 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 QSER1Q2KHR3 1735 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 ARFGEF1Q9Y6D6 1849 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 ZNF205O95201 554 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 NDUFC2O95298 119 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
PTCH1-209ENST00000437951 M0R381 172 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 UCP1P25874 307 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 SLC25A53Q5H9E4 307 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 GTF3AQ92664 365 aaKnown RBP9.81□□□□□ -0.84
PTCH1-209ENST00000437951 TET1Q8NFU7 2136 aa9.81□□□□□ -0.84
PTCH1-209ENST00000437951 SLC25A47Q6Q0C1 308 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms