RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MEF2BQ02080 365 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-216ENST00000437340 PNKDQ8N490 385 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 OR11H6Q8NGC7 330 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 CACNG8Q8WXS5 425 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 TVP23CQ96ET8 276 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 UBTD1Q9HAC8 227 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 KLF2Q9Y5W3 355 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-216ENST00000437340 EIF3GO75821 320 aaKnown RBP eCLIP20.71■□□□□ 0.91
CPNE1-216ENST00000437340 DLX1P56177 255 aa20.71■□□□□ 0.91
CPNE1-216ENST00000437340 B2MP61769 119 aa20.71■□□□□ 0.91
CPNE1-216ENST00000437340 RITA1Q96K30 269 aa20.71■□□□□ 0.91
CPNE1-216ENST00000437340 RNF5Q99942 180 aa20.71■□□□□ 0.91
CPNE1-216ENST00000437340 TMPRSS5Q9H3S3 457 aa20.71■□□□□ 0.91
CPNE1-216ENST00000437340 COL12A1Q99715 3063 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 GPX4P36969 197 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-216ENST00000437340 CDKN1AP38936 164 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 CD69Q07108 199 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 GCSAMLQ5JQS6 135 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 MOB3BQ86TA1 216 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 MMD2Q8IY49 270 aa20.7■□□□□ 0.9
CPNE1-216ENST00000437340 IGHV3-72A0A0B4J1Y9 119 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 CGB1A6NKQ9 187 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 COLCA2A8K830 154 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 E7EUB6 86 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 CRYGBP07316 175 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 MAS1LP35410 378 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 AKR1C3P42330 323 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 EFNA4P52798 201 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 SUB1P53999 127 aaKnown RBP eCLIP20.69■□□□□ 0.9
CPNE1-216ENST00000437340 MRGPRG-AS1Q2M3A8 158 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 C1orf122Q6ZSJ8 110 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 MRPL41Q8IXM3 137 aaKnown RBP20.69■□□□□ 0.9
CPNE1-216ENST00000437340 STPG3Q8N7X2 389 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 TMEM250H0YL14 139 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 CD81P60033 236 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 ARF6P62330 175 aa20.69■□□□□ 0.9
CPNE1-216ENST00000437340 RNASEH2CQ8TDP1 164 aaKnown RBP20.69■□□□□ 0.9
CPNE1-216ENST00000437340 A0A087WWC5 75 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRTN3P24158 256 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRR20EP86478 221 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRR20CP86479 221 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRR20DP86480 221 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRR20BP86481 221 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRR20AP86496 221 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 WT1-ASQ06250 92 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PNRC1Q12796 327 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRSS8Q16651 343 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 SSMEM1Q8WWF3 244 aa20.68■□□□□ 0.9
CPNE1-216ENST00000437340 PRB3Q04118 309 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-216ENST00000437340 GAMTQ14353 236 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 PSG5Q15238 335 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 KIR3DL3Q8N743 410 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 SPTAN1Q13813 2472 aaKnown RBP20.67■□□□□ 0.9
CPNE1-216ENST00000437340 GOSR1O95249 250 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 STAG3L2P0CL84 134 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 STAG3L3P0CL85 134 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 DEFA4P12838 97 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 HTR1DP28221 377 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 TPTE2P1Q5T6R2 138 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 TPSG1Q9NRR2 321 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 SLC45A2Q9UMX9 530 aa20.67■□□□□ 0.9
CPNE1-216ENST00000437340 A0A1W2PPI3 338 aa20.66■□□□□ 0.9
CPNE1-216ENST00000437340 B4DEV8 164 aa20.66■□□□□ 0.9
CPNE1-216ENST00000437340 C10orf55Q5SWW7 151 aa20.66■□□□□ 0.9
CPNE1-216ENST00000437340 DPM3Q9P2X0 92 aa20.66■□□□□ 0.9
CPNE1-216ENST00000437340 SIGLEC9Q9Y336 463 aa20.66■□□□□ 0.9
CPNE1-216ENST00000437340 RHOBP62745 196 aa20.65■□□□□ 0.9
CPNE1-216ENST00000437340 IQCF2Q8IXL9 164 aa20.65■□□□□ 0.9
CPNE1-216ENST00000437340 SLC35E1Q96K37 410 aa20.65■□□□□ 0.9
CPNE1-216ENST00000437340 ODF3BA8MYP8 253 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 ACTL6BO94805 426 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 CXorf1O96002 111 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 CEACAM3P40198 252 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 SLC16A13Q7RTY0 426 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 SIRT7Q9NRC8 400 aa20.64■□□□□ 0.9
CPNE1-216ENST00000437340 NDUFS7O75251 213 aa20.64■□□□□ 0.89
CPNE1-216ENST00000437340 MT-ND4LP03901 98 aa20.64■□□□□ 0.89
CPNE1-216ENST00000437340 LINC00869P0C866 280 aa20.64■□□□□ 0.89
CPNE1-216ENST00000437340 NANPQ8TBE9 248 aa20.64■□□□□ 0.89
CPNE1-216ENST00000437340 SPOCK3Q9BQ16 436 aa20.64■□□□□ 0.89
CPNE1-216ENST00000437340 PAGE4O60829 102 aa20.63■□□□□ 0.89
CPNE1-216ENST00000437340 FOLR2P14207 255 aa20.63■□□□□ 0.89
CPNE1-216ENST00000437340 RPL27AP46776 148 aaKnown RBP20.63■□□□□ 0.89
CPNE1-216ENST00000437340 ZNF114Q8NC26 417 aa20.63■□□□□ 0.89
CPNE1-216ENST00000437340 TXNDC17Q9BRA2 123 aa20.63■□□□□ 0.89
CPNE1-216ENST00000437340 DCHS2Q6V1P9 2916 aa20.63■□□□□ 0.89
CPNE1-216ENST00000437340 UTP20O75691 2785 aaKnown RBP20.62■□□□□ 0.89
CPNE1-216ENST00000437340 IGKV1OR2-108A0A075B7D4 117 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 CNTFRP26992 372 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 COMPP49747 757 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-216ENST00000437340 PVRIGQ6DKI7 326 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 PPP1R27Q86WC6 154 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 ABHD5Q8WTS1 349 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 GATAD1Q8WUU5 269 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 C19orf24Q9BVV8 132 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 SDF2L1Q9HCN8 221 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 IGLC7A0M8Q6 106 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 ZNF727A8MUV8 499 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 IGHV2-5P01817 119 aa20.62■□□□□ 0.89
CPNE1-216ENST00000437340 PLA2G2AP14555 144 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms