RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 C11orf44Q8N8P7 122 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 DTX4Q9Y2E6 619 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 MYO7BQ6PIF6 2116 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
SCN4A-201ENST00000435607 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 OR1P1Q8NH06 330 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 LHBP01229 141 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 CD28P10747 220 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 DRAM1Q8N682 238 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 PEF1Q9UBV8 284 aaKnown RBP9.47□□□□□ -0.89
SCN4A-201ENST00000435607 OVOL1O14753 267 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 TRGC2P03986 189 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 OTX1P32242 354 aaPredicted RBP9.47□□□□□ -0.89
SCN4A-201ENST00000435607 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 TOMM40O96008 361 aa9.46□□□□□ -0.89
SCN4A-201ENST00000435607 ZNF585BQ52M93 769 aa9.46□□□□□ -0.89
SCN4A-201ENST00000435607 OR52E5Q8NH55 327 aa9.46□□□□□ -0.89
SCN4A-201ENST00000435607 PARD6GQ9BYG4 376 aaPredicted RBP9.46□□□□□ -0.89
SCN4A-201ENST00000435607 YLPM1P49750 1951 aaKnown RBP9.46□□□□□ -0.89
SCN4A-201ENST00000435607 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.89
SCN4A-201ENST00000435607 CXorf65A6NEN9 183 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 NDUFA3O95167 84 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 IGF2P01344 180 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 IGKV1D-16P01601 117 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 TBR1Q16650 682 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 ALS2Q96Q42 1657 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 NACAE9PAV3 2078 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 DOCK10Q96BY6 2186 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 DOCK5Q9H7D0 1870 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 SRSF7Q16629 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCN4A-201ENST00000435607 EFNB1P98172 346 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 CFHR1Q03591 330 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 PAX8Q06710 450 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 TRAV40A0A0B4J280 105 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 IGHV2OR16-5A0A0B4J2B6 119 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 SCN4AP35499 1836 aa9.46□□□□□ -0.9
SCN4A-201ENST00000435607 B4DSR2 109 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
SCN4A-201ENST00000435607 SRSF1Q07955 248 aaKnown RBP eCLIP9.45□□□□□ -0.9
SCN4A-201ENST00000435607 LY6DQ14210 128 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 GLMPQ8WWB7 406 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
SCN4A-201ENST00000435607 S4R3C0 116 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 TRAV12-3A0A0B4J271 114 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 CGB3P0DN86 165 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 CEP250Q9BV73 2442 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 ZIC3O60481 467 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 RHOGP84095 191 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 OR4D11Q8NGI4 311 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 INS-IGF2F8WCM5 200 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 INSP01308 110 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 CGB7P0DN87 165 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 KIAA1644Q3SXP7 199 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 RPL39P5Q59GN2 51 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 LHFPL6Q9Y693 200 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 APOHP02749 345 aaPredicted RBP9.45□□□□□ -0.9
SCN4A-201ENST00000435607 SEC11AP67812 179 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 XAF1Q6GPH4 301 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
SCN4A-201ENST00000435607 DOCK9Q9BZ29 2069 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 NPIPB13A6NJU9 1138 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 LIMS2Q7Z4I7 341 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 OTORQ9NRC9 128 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 CBLN2Q8IUK8 224 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 Q96M66 194 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
SCN4A-201ENST00000435607 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 MUC21Q5SSG8 566 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 TEX38Q6PEX7 206 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 TMEM190Q8WZ59 177 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 RMI2Q96E14 147 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 C15orf61A6NNL5 157 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 IGHMP01871 453 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 SPACA3Q8IXA5 215 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
SCN4A-201ENST00000435607 GZMBP10144 247 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 AQP3Q92482 292 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 Q9H3A6 140 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 PILRAQ9UKJ1 303 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 ZNF257Q9Y2Q1 563 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 KLHDC2Q9Y2U9 406 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 ZNF79Q15937 498 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 RCHY1Q96PM5 261 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 TMEM133Q9H2Q1 129 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 MYO5AQ9Y4I1 1855 aaKnown RBP9.43□□□□□ -0.9
SCN4A-201ENST00000435607 SIGLEC15Q6ZMC9 328 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 GDF15Q99988 308 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 MRPS18CQ9Y3D5 142 aaKnown RBP9.43□□□□□ -0.9
SCN4A-201ENST00000435607 UPK2O00526 184 aa9.43□□□□□ -0.9
SCN4A-201ENST00000435607 LGALS1P09382 135 aaKnown RBP9.43□□□□□ -0.9
SCN4A-201ENST00000435607 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms