RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 SDF2L1Q9HCN8 221 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 J3QR89 54 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 HSPB1P04792 205 aaKnown RBP13□□□□□ -0.33
NEDD4-202ENST00000435532 MSMBP08118 114 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 FOSL1P15407 271 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 TCF20Q9UGU0 1960 aaKnown RBP12.99□□□□□ -0.33
NEDD4-202ENST00000435532 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 E7EQL1 145 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF250P15622 560 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 GCHFRP30047 84 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 PMS2P11Q13670 270 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 ADIPOQQ15848 244 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 SRSF7Q16629 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEDD4-202ENST00000435532 H3BUX3 64 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 GGCTO75223 188 aaKnown RBP12.99□□□□□ -0.33
NEDD4-202ENST00000435532 HTN3P15516 51 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 PRB3Q04118 309 aaPredicted RBP12.99□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
NEDD4-202ENST00000435532 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
NEDD4-202ENST00000435532 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 OR8A1Q8NGG7 326 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 KIR2DL4Q99706 377 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 BRWD1Q9NSI6 2320 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 H3BTX0 84 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 DMRTA2Q96SC8 542 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 TNFRSF18Q9Y5U5 241 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 BTF3P20290 206 aaKnown RBP12.98□□□□□ -0.33
NEDD4-202ENST00000435532 PAX8Q06710 450 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 COPS9Q8WXC6 57 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 NUDT3O95989 172 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 PPP1R17O96001 155 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 CD24P25063 80 aa12.98□□□□□ -0.33
NEDD4-202ENST00000435532 CEACAM8P31997 349 aaPredicted RBP12.98□□□□□ -0.33
NEDD4-202ENST00000435532 J3QLI3 93 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF880Q6PDB4 577 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
NEDD4-202ENST00000435532 BEX4Q9NWD9 120 aaPredicted RBP12.97□□□□□ -0.33
NEDD4-202ENST00000435532 AHCTF1Q8WYP5 2266 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF660Q6AZW8 331 aaPredicted RBP12.97□□□□□ -0.33
NEDD4-202ENST00000435532 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 AURKAIP1Q9NWT8 199 aaPredicted RBP12.97□□□□□ -0.33
NEDD4-202ENST00000435532 C9JCJ5 164 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 M0R3E3 92 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 DEFB121Q5J5C9 76 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 COL8A2P25067 703 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 CRYBB3P26998 211 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 PSMB2P49721 201 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 BET1LQ9NYM9 111 aa12.97□□□□□ -0.33
NEDD4-202ENST00000435532 IGFBP2P18065 325 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 SGMS2Q8NHU3 365 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 KCNS1Q96KK3 526 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 NPCDR1Q9BY65 106 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 SCN2AQ99250 2005 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 CD81P60033 236 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 KLRD1Q13241 179 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 IGHV1-3A0A0C4DH29 117 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 C2orf83Q53S99 150 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 NHLRC3Q5JS37 347 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 OR52E5Q8NH55 327 aa12.96□□□□□ -0.33
NEDD4-202ENST00000435532 EMP1P54849 157 aa12.96□□□□□ -0.34
NEDD4-202ENST00000435532 GAFA1Q96PS6 74 aa12.96□□□□□ -0.34
NEDD4-202ENST00000435532 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEDD4-202ENST00000435532 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 SVILO95425 2214 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
NEDD4-202ENST00000435532 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 ZFP30Q9Y2G7 519 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 FMC1Q96HJ9 113 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 C7orf77A4D0Y5 90 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 TFF1P04155 84 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
NEDD4-202ENST00000435532 APC2O95996 2303 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 HLA-DQA1P01909 254 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
NEDD4-202ENST00000435532 PRCDQ00LT1 54 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 DUTP33316 252 aaKnown RBP12.94□□□□□ -0.34
NEDD4-202ENST00000435532 SPSB3Q6PJ21 355 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 FAM89BQ8N5H3 189 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 RNF125Q96EQ8 232 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 CKAP5Q14008 2032 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 TMEM144Q7Z5S9 345 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 SGK494Q96LW2 274 aa12.94□□□□□ -0.34
NEDD4-202ENST00000435532 WISP1O95388 367 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 NEUROG1Q92886 237 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 PLA2G5P39877 138 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms