RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MBNL2Q5VZF2 373 aaKnown RBP12.8□□□□□ -0.36
SCARF1-203ENST00000434376 SPATA31B1PQ5VZV4 182 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 TMEM170AQ8WVE7 144 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
SCARF1-203ENST00000434376 NPCDR1Q9BY65 106 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 IFI27L2Q9H2X8 130 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-203ENST00000434376 OR10J4P0C629 311 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 CD1BP29016 333 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 MS4A5Q9H3V2 200 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-203ENST00000434376 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 RAB4BP61018 213 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-203ENST00000434376 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 TMEM147Q9BVK8 224 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 SLC35D1Q9NTN3 355 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
SCARF1-203ENST00000434376 TOX4O94842 621 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 ADIPOQQ15848 244 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-203ENST00000434376 P2RX4Q99571 388 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
SCARF1-203ENST00000434376 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 HPRT1P00492 218 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 ADH4P08319 380 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 CBLN1P23435 193 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 KRTDAPP60985 99 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 SERF2P84101 59 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 Q8NA96 180 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
SCARF1-203ENST00000434376 PTPRBP23467 1997 aa12.79□□□□□ -0.36
SCARF1-203ENST00000434376 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 CDC34P49427 236 aaPredicted RBP12.78□□□□□ -0.36
SCARF1-203ENST00000434376 SLC35B1P78383 322 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 SRSF7Q16629 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCARF1-203ENST00000434376 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 STUMQ69YW2 141 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 CMTM2Q8TAZ6 248 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 H3BTX0 84 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 HSPB9Q9BQS6 159 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 RPH3ALQ9UNE2 315 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
SCARF1-203ENST00000434376 J3QW42 95 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 LOXL3P58215 753 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 HCP5Q6MZN7 132 aa12.78□□□□□ -0.36
SCARF1-203ENST00000434376 PCP4P48539 62 aa12.77□□□□□ -0.36
SCARF1-203ENST00000434376 MZT1Q08AG7 82 aa12.77□□□□□ -0.36
SCARF1-203ENST00000434376 TMEM14EPQ6UXP3 125 aa12.77□□□□□ -0.36
SCARF1-203ENST00000434376 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.36
SCARF1-203ENST00000434376 HRNRQ86YZ3 2850 aaPredicted RBP12.77□□□□□ -0.36
SCARF1-203ENST00000434376 KBTBD11-OT1A0A1B0GTJ5 212 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 CA2P00918 260 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 RPLP1P05386 114 aaKnown RBP12.77□□□□□ -0.37
SCARF1-203ENST00000434376 TDGF1P3P51864 188 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
SCARF1-203ENST00000434376 GAFA1Q96PS6 74 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 TCF21O43680 179 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 ZNF90Q03938 601 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 LY6DQ14210 128 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 HARBI1Q96MB7 349 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 S4R3C0 116 aa12.77□□□□□ -0.37
SCARF1-203ENST00000434376 CTXND1A0A1B0GTU2 59 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 J3QR06 171 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 SLC17A3O00476 420 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 RAB29O14966 203 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 FOXH1O75593 365 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 IGFBP2P18065 325 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 BTF3L4Q96K17 158 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 SFXN3Q9BWM7 321 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 THBDP07204 575 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 OR10J1P30954 320 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 TBR1Q16650 682 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 OR4P4Q8NGL7 312 aa12.76□□□□□ -0.37
SCARF1-203ENST00000434376 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 NPIPB11E5RHQ5 1161 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 CCL21O00585 134 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 OR7C2O60412 319 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 CEACAM4O75871 244 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 ADMP35318 185 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 KIAA1644Q3SXP7 199 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 ACTL10Q5JWF8 245 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 DIRC2Q96SL1 478 aa12.75□□□□□ -0.37
SCARF1-203ENST00000434376 PSMG3Q9BT73 122 aaPredicted RBP12.75□□□□□ -0.37
SCARF1-203ENST00000434376 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms