RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 A0A1W2PPQ1 181 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 FOXI3A8MTJ6 420 aaPredicted RBP11.11□□□□□ -0.63
NUP50-209ENST00000432340 K7EQG2 157 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 LALBAP00709 142 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 TALDO1P37837 337 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 TAS2R31P59538 309 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 DAD1P61803 113 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
NUP50-209ENST00000432340 ZIK1Q3SY52 487 aaPredicted RBP11.11□□□□□ -0.63
NUP50-209ENST00000432340 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
NUP50-209ENST00000432340 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
NUP50-209ENST00000432340 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
NUP50-209ENST00000432340 K7EIM0 57 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 UPK2O00526 184 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP50-209ENST00000432340 ZNF705DP0CH99 300 aaPredicted RBP11.1□□□□□ -0.63
NUP50-209ENST00000432340 ZNF705BP0CI00 300 aaPredicted RBP11.1□□□□□ -0.63
NUP50-209ENST00000432340 NQO2P16083 231 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 OGFRL1Q5TC84 451 aaPredicted RBP11.1□□□□□ -0.63
NUP50-209ENST00000432340 Q6ZS49 121 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 RAB3CQ96E17 227 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 KCNK15Q9H427 330 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 Q9H8V8 135 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 MDFICQ9P1T7 246 aa11.1□□□□□ -0.63
NUP50-209ENST00000432340 PNMA8CA0A1B0GUJ8 204 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 KRTAP29-1A8MX34 341 aaPredicted RBP11.09□□□□□ -0.63
NUP50-209ENST00000432340 GNG7O60262 68 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 HLA-DQB1P01920 261 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 GADD45AP24522 165 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 ST3GAL4Q11206 333 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 CLINT1Q14677 625 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 USF2Q15853 346 aaPredicted RBP11.09□□□□□ -0.63
NUP50-209ENST00000432340 PLAC9Q5JTB6 97 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 SLC7A6OSQ96CW6 309 aaPredicted RBP11.09□□□□□ -0.63
NUP50-209ENST00000432340 RAB40CQ96S21 281 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
NUP50-209ENST00000432340 J3QRK9 145 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 EI24O14681 340 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 NPPCP23582 126 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
NUP50-209ENST00000432340 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 ICAM4Q14773 271 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 LRRTM1Q86UE6 522 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 DMBX1Q8NFW5 382 aa11.08□□□□□ -0.64
NUP50-209ENST00000432340 RPS10-NUDT3A0A1W2PQS6 291 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 NUDT3O95989 172 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 HPRT1P00492 218 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 HBE1P02100 147 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
NUP50-209ENST00000432340 ACSM3Q53FZ2 586 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 SPAG16Q8N0X2 631 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 CADM3Q8N126 398 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 OR1P1Q8NH06 330 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 SLC25A46Q96AG3 418 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 TMEM80Q96HE8 168 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 TMEM56Q96MV1 263 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 DCSTAMPQ9H295 470 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 Q9H3A6 140 aa11.07□□□□□ -0.64
NUP50-209ENST00000432340 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 IGHV3-66A0A0C4DH42 116 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 HELTA6NFD8 242 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 SLC17A2O00624 439 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 SCGB2A1O75556 95 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 CD37P11049 281 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 ARPC4P59998 168 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 ERVK-16P61578 105 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 CATR1Q13166 79 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 ARL6IP1Q15041 203 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 ZNF600Q6ZNG1 722 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 METTL26Q96S19 204 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 HINT2Q9BX68 163 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 CLEC2DQ9UHP7 191 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 GOLT1BQ9Y3E0 138 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
NUP50-209ENST00000432340 YTHDF2Q9Y5A9 579 aaKnown RBP11.06□□□□□ -0.64
NUP50-209ENST00000432340 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 DENRO43583 198 aaKnown RBP11.05□□□□□ -0.64
NUP50-209ENST00000432340 IGLV2-14P01704 120 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
NUP50-209ENST00000432340 NPBWR1P48145 328 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 ERVFC1-1P60608 527 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 MSMO1Q15800 293 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 RAB11BQ15907 218 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 SSX7Q7RTT5 188 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 DCANP1Q8TF63 244 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 MAFIPQ8WZ33 124 aa11.05□□□□□ -0.64
NUP50-209ENST00000432340 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms