RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 PLET1Q6UQ28 207 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 ETV3LQ6ZN32 361 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 ZNF431Q8TF32 576 aaPredicted RBP11.16□□□□□ -0.62
CSTF3-202ENST00000431742 PLEKHA3Q9HB20 300 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 NUDT19A8MXV4 375 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 I3L521 148 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 ADAP1O75689 374 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 DHFRP00374 187 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 HOXB5P09067 269 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 SPNP16150 400 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 RHOGP84095 191 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 DEFA5Q01523 94 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 DCTN2Q13561 401 aaKnown RBP11.15□□□□□ -0.62
CSTF3-202ENST00000431742 SPINK9Q5DT21 86 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 GGNBP1Q5YKI7 109 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 C8orf86Q6ZUL3 223 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.62
CSTF3-202ENST00000431742 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 NECAP1Q8NC96 275 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 PDCD10Q9BUL8 212 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
CSTF3-202ENST00000431742 INMT-MINDY4F8WBC2 141 aa11.14□□□□□ -0.63
CSTF3-202ENST00000431742 IFNA17P01571 189 aa11.14□□□□□ -0.63
CSTF3-202ENST00000431742 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
CSTF3-202ENST00000431742 HIST1H1BP16401 226 aaKnown RBP11.14□□□□□ -0.63
CSTF3-202ENST00000431742 MFAP2P55001 183 aa11.14□□□□□ -0.63
CSTF3-202ENST00000431742 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
CSTF3-202ENST00000431742 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
CSTF3-202ENST00000431742 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 PRAF2O60831 178 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 OR2J3O76001 311 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 FHL3Q13643 280 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 BSXQ3C1V8 233 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 OR1P1Q8NH06 330 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 P2RX4Q99571 388 aa11.13□□□□□ -0.63
CSTF3-202ENST00000431742 C13orf42A0A1B0GVH6 325 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 MPTX1A8MV57 137 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 SNRPGP15A8MWD9 76 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 NDUFB8O95169 186 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 DEFA4P12838 97 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-202ENST00000431742 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 ZNF343Q6P1L6 599 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 C12orf45Q8N5I9 185 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-202ENST00000431742 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
CSTF3-202ENST00000431742 CCL24O00175 119 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 NXPH3O95157 252 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 IFNA21P01568 189 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
CSTF3-202ENST00000431742 MYCNOSP40205 109 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 ERHP84090 104 aaKnown RBP11.11□□□□□ -0.63
CSTF3-202ENST00000431742 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
CSTF3-202ENST00000431742 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
CSTF3-202ENST00000431742 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-202ENST00000431742 NBEAL1Q6ZS30 2694 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 C7orf66A4D0T2 115 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 CYB5BO43169 146 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 C11orf87Q6NUJ2 197 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 TREML4Q6UXN2 200 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 LINC00482Q8N8I6 264 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 RBKSQ9H477 322 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 THYN1Q9P016 225 aa11.1□□□□□ -0.63
CSTF3-202ENST00000431742 IGHV4OR15-8A0A075B7B6 117 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 A0A087WW49 117 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 K7EIM0 57 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 CCSO14618 274 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 PF4P02776 101 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 SNCAP37840 140 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms