RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 IGHV3OR16-13A0A075B7E8 117 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 IGHV1OR21-1A0A087WYE8 117 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 IGHV3-74A0A0B4J1X5 117 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 AQP3Q92482 292 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 SMPXQ9UHP9 88 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 SPTAN1Q13813 2472 aaKnown RBP14.02□□□□□ -0.17
RIF1-204ENST00000430328 OR9G1Q8NH87 305 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 Q9H3A6 140 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 TRAV41A0A0B4J266 112 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 IL6RP08887 468 aaPredicted RBP14.02□□□□□ -0.17
RIF1-204ENST00000430328 KIAA0040Q15053 153 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 MSRB3Q8IXL7 192 aa14.02□□□□□ -0.17
RIF1-204ENST00000430328 NALCNQ8IZF0 1738 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 UMODP07911 640 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 LIFP15018 202 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 TRIP6Q15654 476 aaKnown RBP14.01□□□□□ -0.17
RIF1-204ENST00000430328 CARHSP1Q9Y2V2 147 aaKnown RBP14.01□□□□□ -0.17
RIF1-204ENST00000430328 GAGE12BA1L429 117 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 EVI2AP22794 236 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 FAM27BQ5VT28 67 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 ZP1P60852 638 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 TMEM170AQ8WVE7 144 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 TRAV8-3A0A0A6YYJ7 113 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 A6NNC1 897 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 MLNRO43193 412 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 LAGE3Q14657 143 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 FOXA2Q9Y261 457 aaPredicted RBP14.01□□□□□ -0.17
RIF1-204ENST00000430328 ITLN1Q8WWA0 313 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 A0A0G2JMM0 328 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 A0A1W2PPB8 328 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 KIR3DP1A8MWS1 328 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 DTX1Q86Y01 620 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 GPHA2Q96T91 129 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 GNB1LQ9BYB4 327 aa14.01□□□□□ -0.17
RIF1-204ENST00000430328 HLA-DQB1P01920 261 aa14□□□□□ -0.17
RIF1-204ENST00000430328 C5orf47Q569G3 176 aa14□□□□□ -0.17
RIF1-204ENST00000430328 TMEM196Q5HYL7 178 aa14□□□□□ -0.17
RIF1-204ENST00000430328 GLRXP35754 106 aa14□□□□□ -0.17
RIF1-204ENST00000430328 H2BFSP57053 126 aa14□□□□□ -0.17
RIF1-204ENST00000430328 MESP2Q0VG99 397 aa14□□□□□ -0.17
RIF1-204ENST00000430328 CHCHD5Q9BSY4 110 aa14□□□□□ -0.17
RIF1-204ENST00000430328 SPANXCQ9NY87 97 aa14□□□□□ -0.17
RIF1-204ENST00000430328 DLL3Q9NYJ7 618 aa14□□□□□ -0.17
RIF1-204ENST00000430328 CACNA1EQ15878 2313 aa14□□□□□ -0.17
RIF1-204ENST00000430328 NDUFC2O95298 119 aa14□□□□□ -0.17
RIF1-204ENST00000430328 CD300EQ496F6 205 aaPredicted RBP14□□□□□ -0.17
RIF1-204ENST00000430328 BCL6BQ8N143 479 aaPredicted RBP14□□□□□ -0.17
RIF1-204ENST00000430328 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 EGR4Q05215 589 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 DRAM1Q8N682 238 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 F2Z2F3 143 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 PLEKHB2Q96CS7 222 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 LINC01555Q8NAE3 123 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 RNASE7Q9H1E1 156 aaKnown RBP13.99□□□□□ -0.17
RIF1-204ENST00000430328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■■■ 46.3
RIF1-204ENST00000430328 ZFP36L2P47974 494 aaKnown RBP13.99□□□□□ -0.17
RIF1-204ENST00000430328 IRF3Q14653 427 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 PPP1R27Q86WC6 154 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 TMEM167AQ8TBQ9 72 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 INAFM2P0DMQ5 153 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 NANOS3P60323 173 aaKnown RBP13.99□□□□□ -0.17
RIF1-204ENST00000430328 LEAP2Q969E1 77 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 NEUROG3Q9Y4Z2 214 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 ARPC1AQ92747 370 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 PEMTQ9UBM1 199 aa13.99□□□□□ -0.17
RIF1-204ENST00000430328 CXorf51AA0A1B0GTR3 108 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 CTGFP29279 349 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 SAXO1Q8IYX7 474 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 NCOR1P1Q9H4R4 102 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 GP6Q9HCN6 339 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 PEX11BO96011 259 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 IFITM1P13164 125 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 MYLKQ15746 1914 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 RBM3P98179 157 aaKnown RBP13.98□□□□□ -0.17
RIF1-204ENST00000430328 PSG4Q00888 419 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 ZNF114Q8NC26 417 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 SSC5DA1L4H1 1573 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 DEFB123Q8N688 67 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 CCL3P10147 92 aa13.98□□□□□ -0.17
RIF1-204ENST00000430328 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 Q6ZNB5 142 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 SOCS3O14543 225 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 DLEU1O43261 78 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 UBE2V1Q13404 147 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 PMVKQ15126 192 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 SCARF2Q96GP6 870 aaPredicted RBP13.97□□□□□ -0.17
RIF1-204ENST00000430328 MYOD1P15172 320 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 TMEM187Q14656 261 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 C1orf162Q8NEQ5 155 aaPredicted RBP13.97□□□□□ -0.17
RIF1-204ENST00000430328 SNHG12Q9BXW3 62 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 PLPPR1Q8TBJ4 325 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 MRPS18AQ9NVS2 196 aaKnown RBP13.97□□□□□ -0.17
RIF1-204ENST00000430328 TNFSF13O75888 250 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 SRP19P09132 144 aaKnown RBP13.97□□□□□ -0.17
RIF1-204ENST00000430328 IGLV3-16A0A075B6K0 115 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 A0A087WX48 190 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms