RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
UBE3D-204ENST00000430071 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
UBE3D-204ENST00000430071 SHPKQ9UHJ6 478 aa13.05□□□□□ -0.32
UBE3D-204ENST00000430071 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 AREGP15514 252 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 C19orf35Q6ZS72 473 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
UBE3D-204ENST00000430071 LSM4Q9Y4Z0 139 aaKnown RBP13.04□□□□□ -0.32
UBE3D-204ENST00000430071 LGALS1P09382 135 aaKnown RBP13.03□□□□□ -0.32
UBE3D-204ENST00000430071 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 TPPP2P59282 170 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 ZNF429Q86V71 674 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 OR5B3Q8NH48 314 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 PALMDQ9NP74 551 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 ZNF257Q9Y2Q1 563 aa13.03□□□□□ -0.32
UBE3D-204ENST00000430071 OVOL1O14753 267 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 ST8SIA3O43173 380 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 RBMXL2O75526 392 aaKnown RBP13.02□□□□□ -0.33
UBE3D-204ENST00000430071 REG1AP05451 166 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 HSPE1P61604 102 aaKnown RBP13.02□□□□□ -0.33
UBE3D-204ENST00000430071 PLET1Q6UQ28 207 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 B9D2Q9BPU9 175 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 COA4Q9NYJ1 87 aa13.02□□□□□ -0.33
UBE3D-204ENST00000430071 TENM3Q9P273 2699 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 NPIPB5A8MRT5 1133 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 LINC01619G3V211 115 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 PRH1P02810 166 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 TRGV3P03979 118 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 HOXB5P09067 269 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 CD69Q07108 199 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
UBE3D-204ENST00000430071 AARDQ4LEZ3 155 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 SPINK9Q5DT21 86 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 COQ8AQ8NI60 647 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
UBE3D-204ENST00000430071 MARVELD1Q9BSK0 173 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.01□□□□□ -0.33
UBE3D-204ENST00000430071 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
UBE3D-204ENST00000430071 INMT-MINDY4F8WBC2 141 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 ADAP1O75689 374 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 IL5P05113 134 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 CRYGCP07315 174 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 SULT1A3P0DMM9 295 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 SULT1A4P0DMN0 295 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 CTRB1P17538 263 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 PSMB6P28072 239 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 PRCDQ00LT1 54 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 GGNBP1Q5YKI7 109 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 THOC7Q6I9Y2 204 aaKnown RBP13□□□□□ -0.33
UBE3D-204ENST00000430071 ZNF431Q8TF32 576 aaPredicted RBP13□□□□□ -0.33
UBE3D-204ENST00000430071 ZNF355PQ9NSJ1 428 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
UBE3D-204ENST00000430071 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 PIGBOS1A0A0B4J2F0 54 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 H3BUA1 57 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 PTTG1O95997 202 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 IFNA17P01571 189 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 OR13C7P0DN81 318 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 ASCL2Q99929 193 aa12.99□□□□□ -0.33
UBE3D-204ENST00000430071 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
UBE3D-204ENST00000430071 A0A1B0GU03 582 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 ANKRD34BA5PLL1 514 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 MPTX1A8MV57 137 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 NXPH3O95157 252 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 BRI3O95415 125 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 SLA2Q9H6Q3 261 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
UBE3D-204ENST00000430071 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 PITX3O75364 302 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 SAP30O75446 220 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 LY86O95711 162 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 TRBV12-3P01733 135 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
UBE3D-204ENST00000430071 ACSM6Q6P461 480 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
UBE3D-204ENST00000430071 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 PDCD10Q9BUL8 212 aa12.97□□□□□ -0.33
UBE3D-204ENST00000430071 HUWE1Q7Z6Z7 4374 aaKnown RBP12.97□□□□□ -0.33
UBE3D-204ENST00000430071 SLC25A6P12236 298 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 MFAP2P55001 183 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 SPCS3P61009 180 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 RHOGP84095 191 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 KLK9Q2XQG4 91 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms