RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 S100GP29377 79 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 LPAR6P43657 344 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 MFAP2P55001 183 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 RELQ04864 619 aaPredicted RBP11.05□□□□□ -0.64
MSH5-208ENST00000429846 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 KCTD21Q4G0X4 260 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 STPG3Q8N7X2 389 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 OR1P1Q8NH06 330 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 GALNT14Q96FL9 552 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 CHRDL1Q9BU40 450 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 C20orf24Q9BUV8 137 aa11.05□□□□□ -0.64
MSH5-208ENST00000429846 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 C15orf61A6NNL5 157 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 F8W735 103 aaPredicted RBP11.04□□□□□ -0.64
MSH5-208ENST00000429846 ADMP35318 185 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 G6PCP35575 357 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 TAS2R20P59543 309 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 Q56UQ5 140 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 RNF183Q96D59 192 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 C6orf62Q9GZU0 229 aaPredicted RBP11.04□□□□□ -0.64
MSH5-208ENST00000429846 FXYD6Q9H0Q3 95 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 TMEM14BQ9NUH8 114 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 NSG2Q9Y328 171 aa11.04□□□□□ -0.64
MSH5-208ENST00000429846 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
MSH5-208ENST00000429846 LY6G6CO95867 125 aa11.03□□□□□ -0.64
MSH5-208ENST00000429846 PMP2P02689 132 aa11.03□□□□□ -0.64
MSH5-208ENST00000429846 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
MSH5-208ENST00000429846 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
MSH5-208ENST00000429846 LPCAT3Q6P1A2 487 aa11.03□□□□□ -0.64
MSH5-208ENST00000429846 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
MSH5-208ENST00000429846 SAMD12Q8N8I0 201 aa11.03□□□□□ -0.64
MSH5-208ENST00000429846 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
MSH5-208ENST00000429846 IGHV3-21A0A0B4J1V1 117 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 CTSDP07339 412 aaPredicted RBP11.02□□□□□ -0.65
MSH5-208ENST00000429846 CTSGP08311 255 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 PRSS3P35030 304 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 HRH1P35367 487 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 ZNF114Q8NC26 417 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 OR10C1Q96KK4 312 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 TXN2Q99757 166 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 MAP6D1Q9H9H5 199 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 SMPXQ9UHP9 88 aa11.02□□□□□ -0.65
MSH5-208ENST00000429846 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
MSH5-208ENST00000429846 IGHV7-4-1A0A0J9YVY3 117 aa11.01□□□□□ -0.65
MSH5-208ENST00000429846 EWSR1Q01844 656 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH5-208ENST00000429846 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
MSH5-208ENST00000429846 TMEM116Q8NCL8 245 aa11.01□□□□□ -0.65
MSH5-208ENST00000429846 CHEK1O14757 476 aa11□□□□□ -0.65
MSH5-208ENST00000429846 ZNF207O43670 478 aaKnown RBP11□□□□□ -0.65
MSH5-208ENST00000429846 CD5P06127 495 aa11□□□□□ -0.65
MSH5-208ENST00000429846 HLA-DMAP28067 261 aa11□□□□□ -0.65
MSH5-208ENST00000429846 TGFBR1P36897 503 aa11□□□□□ -0.65
MSH5-208ENST00000429846 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
MSH5-208ENST00000429846 MFAP4P55083 255 aa11□□□□□ -0.65
MSH5-208ENST00000429846 TSPAN5P62079 268 aa11□□□□□ -0.65
MSH5-208ENST00000429846 PRCDQ00LT1 54 aa11□□□□□ -0.65
MSH5-208ENST00000429846 PHLDA2Q53GA4 152 aa11□□□□□ -0.65
MSH5-208ENST00000429846 GATAD1Q8WUU5 269 aa11□□□□□ -0.65
MSH5-208ENST00000429846 SEC22AQ96IW7 307 aa11□□□□□ -0.65
MSH5-208ENST00000429846 CMTM3Q96MX0 182 aa11□□□□□ -0.65
MSH5-208ENST00000429846 RNF2Q99496 336 aa11□□□□□ -0.65
MSH5-208ENST00000429846 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
MSH5-208ENST00000429846 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
MSH5-208ENST00000429846 VCX3AQ9NNX9 186 aa11□□□□□ -0.65
MSH5-208ENST00000429846 DBX1A6NMT0 343 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 I3L2K1 104 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 RPL35AP18077 110 aaKnown RBP10.99□□□□□ -0.65
MSH5-208ENST00000429846 UCP3P55916 312 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 TBC1D26Q86UD7 250 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 LYSMD2Q8IV50 215 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 GPX8Q8TED1 209 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 SLC25A46Q96AG3 418 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 MISP3Q96FF7 219 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
MSH5-208ENST00000429846 NXF2Q9GZY0 626 aaKnown RBP10.99□□□□□ -0.65
MSH5-208ENST00000429846 TRAV14DV4A0A0A6YYC5 116 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 SMIM31A0A1B0GVY4 71 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 GNG7O60262 68 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 YIF1AO95070 293 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 MT-CO2P00403 227 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 PAFAH1B2P68402 229 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 YIPF6Q96EC8 236 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 ZNF414Q96IQ9 312 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 CSTL1Q9H114 145 aa10.98□□□□□ -0.65
MSH5-208ENST00000429846 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
MSH5-208ENST00000429846 APOA1P02647 267 aa10.97□□□□□ -0.65
MSH5-208ENST00000429846 EIF4EP06730 217 aaKnown RBP10.97□□□□□ -0.65
MSH5-208ENST00000429846 RCVRNP35243 200 aa10.97□□□□□ -0.65
MSH5-208ENST00000429846 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
MSH5-208ENST00000429846 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
MSH5-208ENST00000429846 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
MSH5-208ENST00000429846 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
MSH5-208ENST00000429846 IGKV1-39P01597 117 aa10.96□□□□□ -0.65
MSH5-208ENST00000429846 IGKV1D-39P04432 117 aa10.96□□□□□ -0.65
MSH5-208ENST00000429846 NPBWR1P48145 328 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms