RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 PRR20AP86496 221 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 RAB31Q13636 194 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 C3orf36Q3SXR2 165 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 ZNF664Q8N3J9 261 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 ZADH2Q8N4Q0 377 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 GBGT1Q8N5D6 347 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 ZCCHC14Q8WYQ9 949 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 NEUROG1Q92886 237 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 OR51B2Q9Y5P1 312 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 PTPRZ1P23471 2315 aaPredicted RBP10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 TNCP24821 2201 aa10.91□□□□□ -0.66
SNRNP200-202ENST00000429650 OR10G8Q8NGN5 311 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 GAFA1Q96PS6 74 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 HINT2Q9BX68 163 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 YLPM1P49750 1951 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 PCNX1Q96RV3 2341 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 ZNF292O60281 2723 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 TM4SF20Q53R12 229 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 DEFB108BQ8NET1 73 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 C11orf52Q96A22 123 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 PLCE1Q9P212 2302 aa10.9□□□□□ -0.66
SNRNP200-202ENST00000429650 ZNF705GA8MUZ8 300 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 K7EN84 100 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 MMP23AO75900 390 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 MT-CO2P00403 227 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 IGHV1-46P01743 117 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 LINC00869P0C866 280 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 CCKARP32238 428 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 TNFAIP6P98066 277 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 LBHQ53QV2 105 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 MRPL41Q8IXM3 137 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 OR4P4Q8NGL7 312 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 PRNDQ9UKY0 176 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 ANKRD11Q6UB99 2663 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 FAM216BQ8N7L0 139 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 WFIKKN1Q96NZ8 548 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 CCL13Q99616 98 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 SFXN3Q9BWM7 321 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 CLEC5AQ9NY25 188 aa10.89□□□□□ -0.67
SNRNP200-202ENST00000429650 A0A1B0GUS0 222 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 A8MWP6 167 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 J3QR06 171 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 YPEL3P61236 119 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 HLA-DRB5Q30154 266 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 MIR17HGQ75NE6 70 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 CORO2AQ92828 525 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 PLEKHA3Q9HB20 300 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 C9JCJ5 164 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 UPK2O00526 184 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ACTL6BO94805 426 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 IGKV1-16P04430 117 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ADMP35318 185 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ZNF788Q6ZQV5 615 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 NOL4LQ96MY1 436 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 UHRF2Q96PU4 802 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 TP53TG5Q9Y2B4 290 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 DYSFO75923 2080 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SRRM4A7MD48 611 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SELENOVP59797 346 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SLC25A48Q6ZT89 311 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 C22orf34Q6ZV56 151 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ABHD17AQ96GS6 310 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SPXQ9BT56 116 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 IL36BQ9NZH7 164 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-202ENST00000429650 AREGP15514 252 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 ZNF90Q03938 601 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 ADIPOQQ15848 244 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 MOB3BQ86TA1 216 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 SNRNP40Q96DI7 357 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 EAF1Q96JC9 268 aaPredicted RBP10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 C2orf88Q9BSF0 95 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 LRFN3Q9BTN0 628 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 IGKV1OR2-108A0A075B7D4 117 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 SLC17A3O00476 420 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 TM4SF5O14894 197 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 NUPR1O60356 82 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 CDKN1BP46527 198 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 RTL8BQ17RB0 113 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 TGIF2LXQ8IUE1 241 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 NABP2Q9BQ15 211 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 ARL2-SNX15V9GYD0 113 aa10.87□□□□□ -0.67
SNRNP200-202ENST00000429650 POLEQ07864 2286 aa10.86□□□□□ -0.67
SNRNP200-202ENST00000429650 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
SNRNP200-202ENST00000429650 PSG5Q15238 335 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms