RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LHX2P50458 406 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 CFHR1Q03591 330 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 ZNF525Q8N782 197 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
LDB3-205ENST00000429277 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
LDB3-205ENST00000429277 PSMB11A5LHX3 300 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 IGKV3-20P01619 116 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 APOHP02749 345 aaPredicted RBP10.74□□□□□ -0.69
LDB3-205ENST00000429277 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 Q9H3A6 140 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 C15orf61A6NNL5 157 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 E9PLN8 166 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 FHITP49789 147 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
LDB3-205ENST00000429277 VKORC1Q9BQB6 163 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 COL4A5P29400 1685 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 IGHV3-35A0A0C4DH35 117 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 GRIFINA4D1Z8 144 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
LDB3-205ENST00000429277 EMP1P54849 157 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 TGFAP01135 160 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 CNTFRP26992 372 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 CACNG7P62955 275 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 CLEC19AQ6UXS0 136 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 C9orf106Q8NAJ2 232 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 WBP1Q96G27 269 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 LINC01587Q99440 93 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 SMAD7O15105 426 aaKnown RBP10.73□□□□□ -0.69
LDB3-205ENST00000429277 IGHV3-48P01763 117 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 PPBPP02775 128 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 COL11A2P13942 1736 aaPredicted RBP10.73□□□□□ -0.69
LDB3-205ENST00000429277 IGKV1D-43A0A0B4J1Z2 117 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 UMODP07911 640 aa10.73□□□□□ -0.69
LDB3-205ENST00000429277 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
LDB3-205ENST00000429277 SRSF7Q16629 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
LDB3-205ENST00000429277 OTX1P32242 354 aaPredicted RBP10.72□□□□□ -0.69
LDB3-205ENST00000429277 CCL20P78556 96 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 TFF3Q07654 80 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 MRPL16Q9NX20 251 aaKnown RBP10.72□□□□□ -0.69
LDB3-205ENST00000429277 LRRC37AA6NMS7 1700 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 MPZP25189 248 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 VDAC2P45880 294 aaPredicted RBP10.72□□□□□ -0.69
LDB3-205ENST00000429277 A0A1W2PRE2 83 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 TMEM167AQ8TBQ9 72 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 IL18BPO95998 194 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 ZNF497Q6ZNH5 498 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 ARL6IP6Q8N6S5 226 aa10.72□□□□□ -0.69
LDB3-205ENST00000429277 ZNF646O15015 1829 aaPredicted RBP10.72□□□□□ -0.69
LDB3-205ENST00000429277 SVILO95425 2214 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 TGFBR3LH3BV60 316 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 SCO2A0A1W2PP80 73 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
LDB3-205ENST00000429277 LINC01559Q495D7 138 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 C18orf12Q96KH6 178 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 RBBP6Q7Z6E9 1792 aaKnown RBP10.71□□□□□ -0.69
LDB3-205ENST00000429277 SAA2-SAA4A0A096LPE2 208 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 SAA2P0DJI9 122 aaPredicted RBP10.71□□□□□ -0.69
LDB3-205ENST00000429277 AHCTF1Q8WYP5 2266 aa10.71□□□□□ -0.69
LDB3-205ENST00000429277 CD5P06127 495 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 THBDP07204 575 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 SCN10AQ9Y5Y9 1956 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 TUBGCP6Q96RT7 1819 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 TRGV11A0A075B6L2 103 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 PROB1E7EW31 1015 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 IFITM2Q01629 132 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 COLCA1Q6ZS62 124 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 RNF125Q96EQ8 232 aa10.71□□□□□ -0.7
LDB3-205ENST00000429277 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
LDB3-205ENST00000429277 MORN2Q502X0 79 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 Q5BKY6 102 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 DTX2Q86UW9 622 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 FOXC2Q99958 501 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 POLR2AP24928 1970 aaKnown RBP10.7□□□□□ -0.7
LDB3-205ENST00000429277 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 EIF3GO75821 320 aaKnown RBP eCLIP10.7□□□□□ -0.7
LDB3-205ENST00000429277 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
LDB3-205ENST00000429277 STHQ8IWL8 128 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 LINC00518Q8N0U6 118 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 FAM89BQ8N5H3 189 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 NUDT11Q96G61 164 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 OSTCQ9NRP0 149 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 TBL2Q9Y4P3 447 aaKnown RBP10.7□□□□□ -0.7
LDB3-205ENST00000429277 OOSP1A8MZH6 123 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 EGR1P18146 543 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 PRCDQ00LT1 54 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 PLPPR1Q8TBJ4 325 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms