RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 CX3CL1P78423 397 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ZNF266Q14584 549 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 CLINT1Q14677 625 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR8G2PQ6IF36 304 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 Q6YL49 198 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ETV3LQ6ZN32 361 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ZNF767PQ75MW2 155 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 LILRB2Q8N423 598 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 OR5R1Q8NH85 324 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 TMEM170AQ8WVE7 144 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 PHYHIPLQ96FC7 376 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ATP5SQ99766 215 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 YAE1D1Q9NRH1 226 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 BAHCC1Q9P281 2608 aa10.09□□□□□ -0.79
HMGB3P4-201ENST00000428776 ACANP16112 2415 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 MDFIC2A0A1B0GVS7 189 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 IFNA4P05014 189 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 HNF1AP20823 631 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 LY6EQ16553 131 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 SPNS3Q6ZMD2 512 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 ZNF114Q8NC26 417 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 ZNF680Q8NEM1 530 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 SSMEM1Q8WWF3 244 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 GGACTQ9BVM4 153 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 ARV1Q9H2C2 271 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMEM160Q9NX00 188 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 NOTCH2Q04721 2471 aa10.08□□□□□ -0.8
HMGB3P4-201ENST00000428776 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 BTBD17A6NE02 478 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 CFDP00746 253 aaPredicted RBP10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 IFNA5P01569 189 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 IGHV4-59P01825 116 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 AREGP15514 252 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 SRP14P37108 136 aaKnown RBP10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 DLK1P80370 383 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 EXOSC2Q13868 293 aaKnown RBP10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 ABHD5Q8WTS1 349 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 P2RX4Q99571 388 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 GINS3Q9BRX5 216 aa10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
HMGB3P4-201ENST00000428776 FLNBO75369 2602 aaKnown RBP10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 FNDC10F2Z333 226 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 AMY1AP04745 511 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 REG1AP05451 166 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 FOSL1P15407 271 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 RNASEH2CQ8TDP1 164 aaKnown RBP10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 ZNF48Q96MX3 618 aaPredicted RBP10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMEM147Q9BVK8 224 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 UQCC1Q9NVA1 299 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 UBQLN2Q9UHD9 624 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 CSMD1Q96PZ7 3565 aa10.06□□□□□ -0.8
HMGB3P4-201ENST00000428776 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 TSPAN9O75954 239 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 GPX4P36969 197 aaPredicted RBP10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 SLC25A24Q6NUK1 477 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 ALKAL2Q6UX46 152 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 IL17RELQ6ZVW7 336 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 SGMS2Q8NHU3 365 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 SCARB1Q8WTV0 552 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 GNPNAT1Q96EK6 184 aaPredicted RBP10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 HSPB9Q9BQS6 159 aa10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 FAM103A1Q9BTL3 118 aaKnown RBP10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 F11RQ9Y624 299 aaKnown RBP10.05□□□□□ -0.8
HMGB3P4-201ENST00000428776 CORTO00230 105 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 CRYGCP07315 174 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 APELAP0DMC3 54 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 CTRB1P17538 263 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 NDPQ00604 133 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 CD69Q07108 199 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 HSD17B11Q8NBQ5 300 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 WDR61Q9GZS3 305 aaKnown RBP10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 FBXO7Q9Y3I1 522 aa10.04□□□□□ -0.8
HMGB3P4-201ENST00000428776 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 CYB5BO43169 146 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 SPP1P10451 314 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 DEFA4P12838 97 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 CD99P14209 185 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms