RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 CIB3Q96Q77 187 aaPredicted RBP6.84□□□□□ -1.31
CD44-208ENST00000428726 SLC35D1Q9NTN3 355 aa6.84□□□□□ -1.31
CD44-208ENST00000428726 SORL1Q92673 2214 aa6.84□□□□□ -1.31
CD44-208ENST00000428726 IGHV3OR16-10A0A075B7F0 116 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 C17orf100A8MU93 164 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 CDKN1AP38936 164 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.32
CD44-208ENST00000428726 OR13D1Q8NGV5 346 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 IMMP2LQ96T52 175 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 JPT1Q9UK76 154 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 TIMM9Q9Y5J7 89 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 DMRT1Q9Y5R6 373 aa6.84□□□□□ -1.32
CD44-208ENST00000428726 FBN2P35556 2912 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 KBTBD11-OT1A0A1B0GTJ5 212 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 ZNF729A6NN14 1252 aaPredicted RBP6.83□□□□□ -1.32
CD44-208ENST00000428726 ARL14EPLP0DKL9 152 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CASP6P55212 293 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CD81P60033 236 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 ARF6P62330 175 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 KLRD1Q13241 179 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CR1LQ2VPA4 569 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 TMEM41BQ5BJD5 291 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 HARBI1Q96MB7 349 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 ABCA2Q9BZC7 2435 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 SH2D7A6NKC9 451 aaPredicted RBP6.83□□□□□ -1.32
CD44-208ENST00000428726 J3QR06 171 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 SCGB1D1O95968 90 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CT45A6P0DMU7 189 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CT45A5P0DMU8 189 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CT45A7P0DMV0 189 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 TNFSF4P23510 183 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 NPPCP23582 126 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 DDTP30046 118 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 GALR1P47211 349 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 UQCRFS1P47985 274 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 OR5I1Q13606 314 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 FAM78BQ5VT40 261 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 MORN5Q5VZ52 161 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 CENPVQ7Z7K6 275 aaPredicted RBP6.83□□□□□ -1.32
CD44-208ENST00000428726 OR4P4Q8NGL7 312 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 SFXN3Q9BWM7 321 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 PARLQ9H300 379 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 NF1P21359 2839 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 ACANP16112 2415 aa6.83□□□□□ -1.32
CD44-208ENST00000428726 H7BYZ3 331 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 SIAH2O43255 324 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 YPEL1O60688 119 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 MOSP00540 346 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TDGF1P3P51864 188 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TCL1AP56279 114 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 RELBQ01201 579 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 ARSJQ5FYB0 599 aaPredicted RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 KLF17Q5JT82 389 aaPredicted RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 TGIF2LXQ8IUE1 241 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TMEM256Q8N2U0 113 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 YPEL2Q96QA6 119 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TMEM147Q9BVK8 224 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 SDF2L1Q9HCN8 221 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 CBLN4Q9NTU7 201 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 OR51B2Q9Y5P1 312 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 WNK1Q9H4A3 2382 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 IGLV3-9A0A075B6K5 115 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 PPIAL4EA0A075B759 164 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 A0A087WWC5 75 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 PPP5D1E7EU14 171 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 SLC17A3O00476 420 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 NUPR1O60356 82 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 AMBPP02760 352 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 SAA1P0DJI8 122 aaPredicted RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 PPIAL4FP0DN26 164 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 HIST1H1BP16401 226 aaKnown RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 CEACAM8P31997 349 aaPredicted RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 MAS1LP35410 378 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 BSXQ3C1V8 233 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 MIR17HGQ75NE6 70 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 SLC35E3Q7Z769 313 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 ZNF664Q8N3J9 261 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 OR10A7Q8NGE5 316 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 NCOR1P1Q9H4R4 102 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 ENY2Q9NPA8 101 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 PPIAL4AQ9Y536 164 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 PMS2P5A8MQ11 134 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 C11orf94C9JXX5 98 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 OR7C2O60412 319 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 HPRT1P00492 218 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 LHBP01229 141 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 IFNA1P01562 189 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 CDC34P49427 236 aaPredicted RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 C1QL4Q86Z23 238 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 RNASE6Q93091 150 aaKnown RBP6.82□□□□□ -1.32
CD44-208ENST00000428726 MALSU1Q96EH3 234 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 P2RX4Q99571 388 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 MGST2Q99735 147 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 RAB9BQ9NP90 201 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 TMEM106BQ9NUM4 274 aa6.82□□□□□ -1.32
CD44-208ENST00000428726 MRPL36Q9P0J6 103 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms