RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PRCDQ00LT1 54 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 PRR31Q5SQ13 230 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 CTRB2Q6GPI1 263 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
SGCE-204ENST00000428696 HSD17B13Q7Z5P4 300 aaPredicted RBP11.3□□□□□ -0.6
SGCE-204ENST00000428696 NRARPQ7Z6K4 114 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 OR11H1Q8NG94 326 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
SGCE-204ENST00000428696 SEC22CQ9BRL7 303 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 NDUFB8O95169 186 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 IFNA21P01568 189 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 CRYGCP07315 174 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 CD33P20138 364 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 C15orf32Q32M92 178 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 PLET1Q6UQ28 207 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
SGCE-204ENST00000428696 HEYLQ9NQ87 328 aaPredicted RBP11.29□□□□□ -0.6
SGCE-204ENST00000428696 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 ADAP1O75689 374 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
SGCE-204ENST00000428696 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
SGCE-204ENST00000428696 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
SGCE-204ENST00000428696 MYCNOSP40205 109 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 SPCS3P61009 180 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 THYN1Q9P016 225 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
SGCE-204ENST00000428696 VWFP04275 2813 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 A0A1B0GU03 582 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 I3L521 148 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 ZNF616Q08AN1 781 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 EXOSC2Q13868 293 aaKnown RBP11.27□□□□□ -0.6
SGCE-204ENST00000428696 NMSQ5H8A3 153 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 GGNBP1Q5YKI7 109 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.6
SGCE-204ENST00000428696 FANCD2OSQ96PS1 177 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.6
SGCE-204ENST00000428696 TRRAPQ9Y4A5 3859 aa11.27□□□□□ -0.61
SGCE-204ENST00000428696 PKD1L1Q8TDX9 2849 aa11.27□□□□□ -0.61
SGCE-204ENST00000428696 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 A0A087WW49 117 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 FAM25EA8MYX2 175 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 HSPB1P04792 205 aaKnown RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 LRTM2Q8N967 370 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 P2RX4Q99571 388 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 ZC4H2Q9NQZ6 224 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 INMT-MINDY4F8WBC2 141 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 LINC01619G3V211 115 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 BRI3O95415 125 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 SUB1P53999 127 aaKnown RBP eCLIP11.26□□□□□ -0.61
SGCE-204ENST00000428696 SLURP1P55000 103 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 UBAC2Q8NBM4 344 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 ZNF431Q8TF32 576 aaPredicted RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 MAGT1Q9H0U3 335 aa11.26□□□□□ -0.61
SGCE-204ENST00000428696 RANGRFQ9HD47 186 aaPredicted RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 PAIP2BQ9ULR5 123 aaKnown RBP11.26□□□□□ -0.61
SGCE-204ENST00000428696 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 MPTX1A8MV57 137 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 TRBV12-3P01733 135 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 OR8U8P0C7N1 319 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 IGLL1P15814 213 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 SPNP16150 400 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 MFAP2P55001 183 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 RUNX1Q01196 453 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 ZNF343Q6P1L6 599 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
SGCE-204ENST00000428696 DUSP18Q8NEJ0 188 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 OR1L6Q8NGR2 347 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 CXorf58Q96LI9 332 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 RBKSQ9H477 322 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
SGCE-204ENST00000428696 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
SGCE-204ENST00000428696 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 MFSD2BA6NFX1 497 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 CCSO14618 274 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 IFNA10P01566 189 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 IAPPP10997 89 aa11.24□□□□□ -0.61
SGCE-204ENST00000428696 C11orf87Q6NUJ2 197 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms