RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 A0A0A6YYJ9 748 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 H7C1H1 209 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 GIPP09681 153 aaPredicted RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 GRNP28799 593 aaKnown RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 MFAP2P55001 183 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 RIGQ13278 110 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 BAP18Q8IXM2 172 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 KIR3DL3Q8N743 410 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 SPATA3Q8NHX4 192 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 GSX2Q9BZM3 304 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 C5orf42Q9H799 3197 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 G3V3Q6 166 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 IGHV1-8P0DP01 117 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 ATP5IP56385 69 aaPredicted RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 ZNF600Q6ZNG1 722 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 OR1N2Q8NGR9 330 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 ABHD1Q96SE0 405 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 NEU1Q99519 415 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 RCC2Q9P258 522 aaKnown RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 OVOL1O14753 267 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 HSBP1O75506 76 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 PTBP3O95758 552 aaKnown RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 MELTFP08582 738 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 UBE2E1P51965 193 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 APOC4P55056 127 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 FAM120AOSQ5T036 256 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 ZNF660Q6AZW8 331 aaPredicted RBP6□□□□□ -1.45
CNOT4-206ENST00000428680 FAM169BQ8N8A8 192 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 Q8NFD4 153 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 NABP1Q96AH0 204 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 TNFRSF18Q9Y5U5 241 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 CELSR3Q9NYQ7 3312 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 DSPPQ9NZW4 1301 aa6□□□□□ -1.45
CNOT4-206ENST00000428680 NDUFS7O75251 213 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 WISP3O95389 354 aaPredicted RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 CGB7P0DN87 165 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 CTF1Q16619 201 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 PRSS53Q2L4Q9 553 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 TPTE2P1Q5T6R2 138 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 HEPN1Q6WQI6 88 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 NECAP1Q8NC96 275 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 PTX4Q96A99 478 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 LYRM2Q9NU23 88 aaPredicted RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 FAM215AQ9Y5M1 114 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 FOXI3A8MTJ6 420 aaPredicted RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 RRHO14718 337 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 NANOS3P60323 173 aaKnown RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 RAB32Q13637 225 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 PSMG4Q5JS54 123 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 KLHDC1Q8N7A1 406 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 OR2D3Q8NGH3 330 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 HSPB7Q9UBY9 170 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 HSF4Q9ULV5 492 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 DUXBA0A1W2PPF3 345 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 TMEM189A5PLL7 270 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 MFNGO00587 321 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 SPINK4O60575 86 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 PRSS1P07477 247 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 SOD3P08294 240 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 CGB3P0DN86 165 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 HINT1P49773 126 aaPredicted RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 ZNF146Q15072 292 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 TCF24Q7RTU0 167 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 USMG5Q96IX5 58 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 TRAF4Q9BUZ4 470 aaPredicted RBP5.99□□□□□ -1.45
CNOT4-206ENST00000428680 DNAJC4Q9NNZ3 241 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 OPN4Q9UHM6 478 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 FREM1Q5H8C1 2179 aa5.99□□□□□ -1.45
CNOT4-206ENST00000428680 SELLP14151 372 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 JUNBP17275 347 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 FSTP19883 344 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 SULT1A1P50225 295 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 TMEM50BP56557 158 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 SYNJ2BPP57105 145 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 SRSF4Q08170 494 aaKnown RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 MIDNQ504T8 468 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 HIST2H2BCQ6DN03 193 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 SRD5A3Q9H8P0 318 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 USP9YO00507 2555 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 NDUFB6O95139 128 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 GCSHP23434 173 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 LYZL2Q7Z4W2 148 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 LPAR5Q9H1C0 372 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 NRN1Q9NPD7 142 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 JKAMPQ9P055 326 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 IGHV4-30-2A0A087WSY4 118 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 IGHV2-70DA0A0C4DH43 119 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 PRSS2P07478 247 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 XAF1Q6GPH4 301 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 COMMD7Q86VX2 200 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 IL17DQ8TAD2 202 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 NOL4LQ96MY1 436 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 PRRC2AP48634 2157 aaKnown RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 ELOA3CA0A087WX78 387 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 IGKV1D-43A0A0B4J1Z2 117 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 A0A1W2PPQ1 181 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 C9orf170A2RU37 121 aa5.98□□□□□ -1.45
CNOT4-206ENST00000428680 NKX2-5P52952 324 aaPredicted RBP5.98□□□□□ -1.45
CNOT4-206ENST00000428680 DLX1P56177 255 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms