RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 RFX2P48378 723 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 MFAP2P55001 183 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 RELQ04864 619 aaPredicted RBP12.9□□□□□ -0.34
DDR1-235ENST00000428153 CEMP1Q6PRD7 247 aaPredicted RBP12.9□□□□□ -0.34
DDR1-235ENST00000428153 OR6F1Q8NGZ6 308 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 TMEM14BQ9NUH8 114 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 KMT2AQ03164 3969 aa12.9□□□□□ -0.34
DDR1-235ENST00000428153 FCER2P06734 321 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 S100GP29377 79 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 LPAR6P43657 344 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 KCTD21Q4G0X4 260 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 LPCAT3Q6P1A2 487 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 OR5H2Q8NGV7 314 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 OR10C1Q96KK4 312 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 TXN2Q99757 166 aa12.89□□□□□ -0.35
DDR1-235ENST00000428153 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
DDR1-235ENST00000428153 KLK5Q9Y337 293 aaPredicted RBP12.89□□□□□ -0.35
DDR1-235ENST00000428153 FRAS1Q86XX4 4008 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 C15orf61A6NNL5 157 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
DDR1-235ENST00000428153 CTSGP08311 255 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 RPA2P15927 270 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 TAS2R20P59543 309 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 ZNF114Q8NC26 417 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 HINT2Q9BX68 163 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 UBQLN2Q9UHD9 624 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
DDR1-235ENST00000428153 LY6G6CO95867 125 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 CD5P06127 495 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 CTSDP07339 412 aaPredicted RBP12.87□□□□□ -0.35
DDR1-235ENST00000428153 PRSS3P35030 304 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 G6PCP35575 357 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 PMS2P11Q13670 270 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 NEDD8Q15843 81 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 Q56UQ5 140 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 FXYD6Q9H0Q3 95 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
DDR1-235ENST00000428153 PMP2P02689 132 aa12.86□□□□□ -0.35
DDR1-235ENST00000428153 MFAP4P55083 255 aa12.86□□□□□ -0.35
DDR1-235ENST00000428153 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDR1-235ENST00000428153 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
DDR1-235ENST00000428153 GATAD1Q8WUU5 269 aa12.86□□□□□ -0.35
DDR1-235ENST00000428153 IGHV7-4-1A0A0J9YVY3 117 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 I3L2K1 104 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 CHEK1O14757 476 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 SEC22AQ96IW7 307 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
DDR1-235ENST00000428153 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
DDR1-235ENST00000428153 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 HRH1P35367 487 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
DDR1-235ENST00000428153 UCP3P55916 312 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 GPX8Q8TED1 209 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 RNF2Q99496 336 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 SCPEP1Q9HB40 452 aa12.84□□□□□ -0.35
DDR1-235ENST00000428153 DBX1A6NMT0 343 aa12.83□□□□□ -0.36
DDR1-235ENST00000428153 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
DDR1-235ENST00000428153 OR4A16Q8NH70 328 aa12.83□□□□□ -0.36
DDR1-235ENST00000428153 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
DDR1-235ENST00000428153 GINS3Q9BRX5 216 aa12.83□□□□□ -0.36
DDR1-235ENST00000428153 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
DDR1-235ENST00000428153 RPL35AP18077 110 aaKnown RBP12.82□□□□□ -0.36
DDR1-235ENST00000428153 HLA-DMAP28067 261 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
DDR1-235ENST00000428153 TSPAN5P62079 268 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
DDR1-235ENST00000428153 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 H2BFWTQ7Z2G1 175 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
DDR1-235ENST00000428153 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
DDR1-235ENST00000428153 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 INS-IGF2F8WCM5 200 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 YIF1AO95070 293 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 MT-CO2P00403 227 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 APOA1P02647 267 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
DDR1-235ENST00000428153 YIPF6Q96EC8 236 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 MFFQ9GZY8 342 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
DDR1-235ENST00000428153 GNG7O60262 68 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms