RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 P0C879 139 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 S100A5P33763 92 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 NAA60Q9H7X0 242 aa11.3□□□□□ -0.6
RTN4-210ENST00000427710 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 A0A0B4J293 547 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 UCP1P25874 307 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 PRCDQ00LT1 54 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
RTN4-210ENST00000427710 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 Q8N402 240 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 RNASE11Q8TAA1 199 aaKnown RBP11.29□□□□□ -0.6
RTN4-210ENST00000427710 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 TRIM63Q969Q1 353 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 TMEM230Q96A57 120 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 CXorf58Q96LI9 332 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 PRRT1Q99946 306 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 PEMTQ9UBM1 199 aa11.29□□□□□ -0.6
RTN4-210ENST00000427710 ZNF320A2RRD8 509 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 OR2T8A6NH00 312 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
RTN4-210ENST00000427710 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 HSPE1P61604 102 aaKnown RBP11.28□□□□□ -0.6
RTN4-210ENST00000427710 Q6ZRM9 215 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 HSD17B13Q7Z5P4 300 aaPredicted RBP11.28□□□□□ -0.6
RTN4-210ENST00000427710 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
RTN4-210ENST00000427710 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 GLYATL2Q8WU03 294 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 MISP3Q96FF7 219 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 THYN1Q9P016 225 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
RTN4-210ENST00000427710 DNAH7Q8WXX0 4024 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 K7EIM0 57 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 ETV6P41212 452 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
RTN4-210ENST00000427710 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
RTN4-210ENST00000427710 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 PLET1Q6UQ28 207 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 UNQ9165/PRO28630Q6UXU0 137 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 GPHB5Q86YW7 130 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 DYNLRB2Q8TF09 96 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
RTN4-210ENST00000427710 CYB5BO43169 146 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 TGOLN2O43493 480 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 NXPH3O95157 252 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 CDS2O95674 445 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 IFNA17P01571 189 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 FOLR2P14207 255 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 AKR1C4P17516 323 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
RTN4-210ENST00000427710 TM4SF20Q53R12 229 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 TMEM268Q5VZI3 342 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 Q8N1Y9 231 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 VN1R17PQ8TDU5 208 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 GPR146Q96CH1 333 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 RRNAD1Q96FB5 475 aaKnown RBP11.26□□□□□ -0.61
RTN4-210ENST00000427710 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
RTN4-210ENST00000427710 IGHV3OR16-8A0A075B7F1 116 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
RTN4-210ENST00000427710 LGALS9O00182 355 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 ATG12O94817 140 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 ERHP84090 104 aaKnown RBP11.25□□□□□ -0.61
RTN4-210ENST00000427710 DHODHQ02127 395 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 TMEM187Q14656 261 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 Q56UQ5 140 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 ZNF57Q68EA5 555 aaPredicted RBP11.25□□□□□ -0.61
RTN4-210ENST00000427710 SLC35G3Q8N808 338 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 OR1P1Q8NH06 330 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 PINX1Q96BK5 328 aaKnown RBP11.25□□□□□ -0.61
RTN4-210ENST00000427710 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
RTN4-210ENST00000427710 I3L2K1 104 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
RTN4-210ENST00000427710 MT-CO2P00403 227 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
RTN4-210ENST00000427710 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
RTN4-210ENST00000427710 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 SGPP2Q8IWX5 399 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 RBPMSQ93062 196 aaKnown RBP11.24□□□□□ -0.61
RTN4-210ENST00000427710 PDCD10Q9BUL8 212 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 CACNG5Q9UF02 275 aa11.24□□□□□ -0.61
RTN4-210ENST00000427710 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms