RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 MRPS10P82664 201 aaKnown RBP13.9□□□□□ -0.18
GPC1-205ENST00000427506 STEAP1BQ6NZ63 245 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 CCDC71LQ8N9Z2 235 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 UBAC2Q8NBM4 344 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 OR4D10Q8NGI6 311 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 TERB2Q8NHR7 220 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 C21orf62Q9NYP8 219 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 COPZ2Q9P299 210 aa13.9□□□□□ -0.18
GPC1-205ENST00000427506 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 C3orf84H3BNL1 204 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 CD74P04233 296 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 AKR1C2P52895 323 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 TMBIM6P55061 237 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 IL18Q14116 193 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 HAGHQ16775 308 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 Q56UQ5 140 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 SCARB1Q8WTV0 552 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 MARC2Q969Z3 335 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 BSCL2Q96G97 398 aaPredicted RBP13.89□□□□□ -0.19
GPC1-205ENST00000427506 DIRAS2Q96HU8 199 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 MLXQ9UH92 298 aa13.89□□□□□ -0.19
GPC1-205ENST00000427506 ATG12O94817 140 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 SCAF4O95104 1147 aaKnown RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 HSPE1P61604 102 aaKnown RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 PRCDQ00LT1 54 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 SSBP1Q04837 148 aaKnown RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 SPSB3Q6PJ21 355 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 SLC16A13Q7RTY0 426 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 TMEM61Q8N0U2 210 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 DEFB125Q8N687 156 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 OR1P1Q8NH06 330 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 MUC7Q8TAX7 377 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 MISP3Q96FF7 219 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 BCL7BQ9BQE9 202 aa13.88□□□□□ -0.19
GPC1-205ENST00000427506 ZNF436Q9C0F3 470 aaPredicted RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 CCDC59Q9P031 241 aaKnown RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 MRPL27Q9P0M9 148 aaKnown RBP13.88□□□□□ -0.19
GPC1-205ENST00000427506 TENM3Q9P273 2699 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 OR11H12B2RN74 326 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 K7EIM0 57 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 ELLP55199 621 aaPredicted RBP13.87□□□□□ -0.19
GPC1-205ENST00000427506 ERHP84090 104 aaKnown RBP13.87□□□□□ -0.19
GPC1-205ENST00000427506 MEF2DQ14814 521 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 IZUMO4Q1ZYL8 232 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 SP6Q3SY56 376 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 RBPMS2Q6ZRY4 209 aaKnown RBP13.87□□□□□ -0.19
GPC1-205ENST00000427506 OR2C3Q8N628 320 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 OR52B4Q8NGK2 314 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 OR13C8Q8NGS7 320 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 DYNC2LI1Q8TCX1 351 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 ATP6V0BQ99437 205 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 C6orf62Q9GZU0 229 aaPredicted RBP13.87□□□□□ -0.19
GPC1-205ENST00000427506 CEPT1Q9Y6K0 416 aa13.87□□□□□ -0.19
GPC1-205ENST00000427506 DISC1C4P0D8 188 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 RPL5P46777 297 aaKnown RBP13.86□□□□□ -0.19
GPC1-205ENST00000427506 ANKRD55Q3KP44 614 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 SPINK9Q5DT21 86 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 FAAP20Q6NZ36 180 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 RNASE11Q8TAA1 199 aaKnown RBP13.86□□□□□ -0.19
GPC1-205ENST00000427506 SMIM4Q8WVI0 70 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 TMEM190Q8WZ59 177 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 CHRDL1Q9BU40 450 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 PDCD10Q9BUL8 212 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 C20orf24Q9BUV8 137 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 WFDC10AQ9H1F0 79 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 SRD5A3Q9H8P0 318 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 GAR1Q9NY12 217 aaKnown RBP13.86□□□□□ -0.19
GPC1-205ENST00000427506 RABL2AQ9UBK7 228 aaPredicted RBP13.86□□□□□ -0.19
GPC1-205ENST00000427506 RABL2BQ9UNT1 228 aa13.86□□□□□ -0.19
GPC1-205ENST00000427506 C14orf166Q9Y224 244 aaKnown RBP13.86□□□□□ -0.19
GPC1-205ENST00000427506 NDUFA4O00483 81 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 IFNA17P01571 189 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 IGKV1-5P01602 117 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 CTSDP07339 412 aaPredicted RBP13.85□□□□□ -0.19
GPC1-205ENST00000427506 AKAIN1P0CW23 69 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 C8orf88P0DMB2 117 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 SLC35G3Q8N808 338 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 RRNAD1Q96FB5 475 aaKnown RBP13.85□□□□□ -0.19
GPC1-205ENST00000427506 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
GPC1-205ENST00000427506 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
GPC1-205ENST00000427506 CTDSPLO15194 276 aa13.84□□□□□ -0.19
GPC1-205ENST00000427506 NUPL2O15504 423 aaKnown RBP13.84□□□□□ -0.19
GPC1-205ENST00000427506 SNCAP37840 140 aa13.84□□□□□ -0.19
GPC1-205ENST00000427506 MFAP4P55083 255 aa13.84□□□□□ -0.19
GPC1-205ENST00000427506 PINX1Q96BK5 328 aaKnown RBP13.84□□□□□ -0.19
GPC1-205ENST00000427506 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
GPC1-205ENST00000427506 IGHV3OR16-8A0A075B7F1 116 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 A0A0B4J293 547 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 TEX13DA0A0J9YY54 714 aaPredicted RBP13.83□□□□□ -0.2
GPC1-205ENST00000427506 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
GPC1-205ENST00000427506 ST8SIA3O43173 380 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 B3GALNT1O75752 331 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 MT-CO2P00403 227 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 LYL1P12980 280 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 ADMP35318 185 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms