RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 FBXL15Q9H469 300 aa21.31■■□□□ 1
SH3GL3-202ENST00000427482 RBFOX3A6NFN3 312 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 COMPP49747 757 aaPredicted RBP21.3■■□□□ 1
SH3GL3-202ENST00000427482 LGALS4P56470 323 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 SSX2Q16385 188 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 TEPPQ6URK8 271 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 DYNAPQ8N1N2 210 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 ABCA2Q9BZC7 2435 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 NAV3Q8IVL0 2385 aa21.3■■□□□ 1
SH3GL3-202ENST00000427482 MAP1LC3B2A6NCE7 125 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 ACTL6BO94805 426 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 M6PRP20645 277 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 PAX6P26367 422 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 UBE2E1P51965 193 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 MAP1LC3BQ9GZQ8 125 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 SMDT1Q9H4I9 107 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 TBL2Q9Y4P3 447 aaKnown RBP21.29■■□□□ 1
SH3GL3-202ENST00000427482 MOSP00540 346 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 OR13C7P0DN81 318 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 PAX1P15863 534 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 PPT1P50897 306 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 ACOT6Q3I5F7 207 aaPredicted RBP21.29■■□□□ 1
SH3GL3-202ENST00000427482 NRGNQ92686 78 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 PERPQ96FX8 193 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 RARRES2Q99969 163 aa21.29■■□□□ 1
SH3GL3-202ENST00000427482 CTXND1A0A1B0GTU2 59 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 IGLC7A0M8Q6 106 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 CD69Q07108 199 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 GUCA2BQ16661 112 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 MRPL41Q8IXM3 137 aaKnown RBP21.28■■□□□ 1
SH3GL3-202ENST00000427482 P2RX4Q99571 388 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 LPAR2Q9HBW0 351 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 KCNIP2Q9NS61 270 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 SLC39A9Q9NUM3 307 aa21.28■■□□□ 1
SH3GL3-202ENST00000427482 IGHV4-30-2A0A087WSY4 118 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 SUB1P53999 127 aaKnown RBP eCLIP21.27■■□□□ 1
SH3GL3-202ENST00000427482 FGF8P55075 233 aaPredicted RBP21.27■■□□□ 1
SH3GL3-202ENST00000427482 MMDQ15546 238 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 ATRAIDQ6UW56 229 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 SVBPQ8N300 66 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 NPBQ8NG41 125 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 C17orf50Q8WW18 174 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 EAF1Q96JC9 268 aaPredicted RBP21.27■■□□□ 1
SH3GL3-202ENST00000427482 ACTR3CQ9C0K3 210 aaPredicted RBP21.27■■□□□ 1
SH3GL3-202ENST00000427482 SLC25A22Q9H936 323 aa21.27■■□□□ 1
SH3GL3-202ENST00000427482 NBR2O15453 112 aa21.27■□□□□ 0.99
SH3GL3-202ENST00000427482 HAGHQ16775 308 aa21.27■□□□□ 0.99
SH3GL3-202ENST00000427482 PXMP4Q9Y6I8 212 aa21.27■□□□□ 0.99
SH3GL3-202ENST00000427482 NDUFA3O95167 84 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 GPX4P36969 197 aaPredicted RBP21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 GNB1P62873 340 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 SSBP2P81877 361 aaPredicted RBP21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 ZNF506Q5JVG8 444 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 FAM122CQ6P4D5 195 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 TMEM144Q7Z5S9 345 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 RNASEH2CQ8TDP1 164 aaKnown RBP21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 CACNG8Q8WXS5 425 aa21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 UTP20O75691 2785 aaKnown RBP21.26■□□□□ 0.99
SH3GL3-202ENST00000427482 YIF1AO95070 293 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 SNRNP70P08621 437 aaKnown RBP21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 RAB31Q13636 194 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 GAMTQ14353 236 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 PLGLAQ15195 96 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 MIC13Q5XKP0 118 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 ZNF114Q8NC26 417 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 OR2T10Q8NGZ9 312 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 FCN1O00602 326 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 CYB5BO43169 146 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 CD24P25063 80 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 PAX8Q06710 450 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 ICAM4Q14773 271 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 SLC35B3Q9H1N7 401 aa21.25■□□□□ 0.99
SH3GL3-202ENST00000427482 FAM208BQ5VWN6 2430 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 SEC14L6B5MCN3 397 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 EIF3GO75821 320 aaKnown RBP eCLIP21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 REG1AP05451 166 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 MLANAQ16655 118 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 FBLN7Q53RD9 439 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 SLC16A13Q7RTY0 426 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 AJUBAQ96IF1 538 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 GNG13Q9P2W3 67 aa21.24■□□□□ 0.99
SH3GL3-202ENST00000427482 LOC102723971A0A1B0GUV8 181 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 TEX22C9J3V5 150 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 DSCR9P59020 149 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 HES1Q14469 280 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 GCSAMLQ5JQS6 135 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 PVRIGQ6DKI7 326 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 SSMEM1Q8WWF3 244 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 SRSF12Q8WXF0 261 aaKnown RBP21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 RAB24Q969Q5 203 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 MALSU1Q96EH3 234 aa21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 ASH1LQ9NR48 2969 aaKnown RBP21.23■□□□□ 0.99
SH3GL3-202ENST00000427482 AREGP15514 252 aa21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 RPL29P47914 159 aaKnown RBP21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 CDC34P49427 236 aaPredicted RBP21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 EBI3Q14213 229 aa21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 KHDC3LQ587J8 217 aa21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 Q8N6K4 173 aa21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 NKX6-2Q9C056 277 aaPredicted RBP21.22■□□□□ 0.99
SH3GL3-202ENST00000427482 B2MP61769 119 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms