RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RPS19P39019 145 aaKnown RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 TAS2R20P59543 309 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 ERVK-16P61578 105 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 PMS2P11Q13670 270 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 LYG2Q86SG7 212 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 LYSMD2Q8IV50 215 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 SLC38A6Q8IZM9 456 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 CADM3Q8N126 398 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 LSM10Q969L4 123 aaKnown RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 DGCR14Q96DF8 476 aaKnown RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 HINT2Q9BX68 163 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 Q9H521 79 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 IFT46Q9NQC8 304 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 DAZ1Q9NQZ3 744 aaKnown RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 OR51B2Q9Y5P1 312 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 CXorf65A6NEN9 183 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 K7EMT4 169 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 CTSDP07339 412 aaPredicted RBP7.42□□□□□ -1.22
GACAT3-201ENST00000426539 CTSGP08311 255 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 APOC4P55056 127 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 KCTD21Q4G0X4 260 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 UBE2NLQ5JXB2 153 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 RNF183Q96D59 192 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 S100A16Q96FQ6 103 aaKnown RBP7.42□□□□□ -1.22
GACAT3-201ENST00000426539 ATP6V0BQ99437 205 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 C20orf24Q9BUV8 137 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 TMEM14BQ9NUH8 114 aa7.42□□□□□ -1.22
GACAT3-201ENST00000426539 KIR2DL5BA0A0G2JN68 375 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 KIR2DL5BA0A0G2JPC4 375 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 C15orf62A8K5M9 175 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 I3L2K1 104 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 GPR31O00270 319 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 UBE2CO00762 179 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 CYB5BO43169 146 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 LY6G6CO95867 125 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 IGKV1-39P01597 117 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 IGKV1D-39P04432 117 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 RPL35AP18077 110 aaKnown RBP7.41□□□□□ -1.22
GACAT3-201ENST00000426539 BMI1P35226 326 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 ZNF124Q15973 351 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 Q56UQ5 140 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 TMEM69Q5SWH9 247 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
GACAT3-201ENST00000426539 KIR2DL5AQ8N109 375 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 SAMD12Q8N8I0 201 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 UBAC2Q8NBM4 344 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 OR5H2Q8NGV7 314 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 OR5B3Q8NH48 314 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 KIR2DL5BQ8NHK3 375 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 BORCS5Q969J3 196 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 YIPF6Q96EC8 236 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 RNF2Q99496 336 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 MAP6D1Q9H9H5 199 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 SMPXQ9UHP9 88 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 PRNDQ9UKY0 176 aa7.41□□□□□ -1.22
GACAT3-201ENST00000426539 IGHV3-49A0A0A0MS15 119 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 IGHV7-4-1A0A0J9YVY3 117 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 CHEK1O14757 476 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 SNAPC5O75971 98 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 EIF4EP06730 217 aaKnown RBP7.4□□□□□ -1.22
GACAT3-201ENST00000426539 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
GACAT3-201ENST00000426539 HLA-DMAP28067 261 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 FCGR2BP31994 310 aaPredicted RBP7.4□□□□□ -1.22
GACAT3-201ENST00000426539 HRH1P35367 487 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 TAS2R46P59540 309 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 LSM3P62310 102 aaKnown RBP7.4□□□□□ -1.22
GACAT3-201ENST00000426539 PHLDA2Q53GA4 152 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 FAM90A2PQ658T7 463 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 LAMTOR1Q6IAA8 161 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 CROCCP3Q8IVE0 287 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 APRG1Q8IVJ8 170 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 OR6F1Q8NGZ6 308 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 OR1P1Q8NH06 330 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 GPX8Q8TED1 209 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 SEC22AQ96IW7 307 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 OR10C1Q96KK4 312 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 RHPN1-AS1Q9BWJ2 59 aa7.4□□□□□ -1.22
GACAT3-201ENST00000426539 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 PRSS3P35030 304 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 TBC1D26Q86UD7 250 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 CMTM1Q8IZ96 169 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 TSPAN14Q8NG11 270 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 SLC25A46Q96AG3 418 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 MISP3Q96FF7 219 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 TMEM56Q96MV1 263 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 FAM212BQ9NTI7 297 aaPredicted RBP7.39□□□□□ -1.23
GACAT3-201ENST00000426539 FKBP11Q9NYL4 201 aa7.39□□□□□ -1.23
GACAT3-201ENST00000426539 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 MT-CO2P00403 227 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms