RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RUNX1Q01196 453 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 GGNBP1Q5YKI7 109 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 PLET1Q6UQ28 207 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 OR2C3Q8N628 320 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 NECAP1Q8NC96 275 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 ZNF431Q8TF32 576 aaPredicted RBP18.97■□□□□ 0.63
VEGFA-209ENST00000425836 USMG5Q96IX5 58 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 DMRT1Q9Y5R6 373 aa18.97■□□□□ 0.63
VEGFA-209ENST00000425836 IGLV11-55A0A075B6I3 123 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 C13orf42A0A1B0GVH6 325 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 ADAP1O75689 374 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 DEFB136Q30KP8 78 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 PDLIM3Q53GG5 364 aaPredicted RBP18.96■□□□□ 0.63
VEGFA-209ENST00000425836 ETV3LQ6ZN32 361 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 MRPL41Q8IXM3 137 aaKnown RBP18.96■□□□□ 0.63
VEGFA-209ENST00000425836 RAX2Q96IS3 184 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 PALMDQ9NP74 551 aa18.96■□□□□ 0.63
VEGFA-209ENST00000425836 F11RQ9Y624 299 aaKnown RBP18.96■□□□□ 0.63
VEGFA-209ENST00000425836 FAM223BA6NKX1 122 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 INS-IGF2F8WCM5 200 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 IL5P05113 134 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 LGALS1P09382 135 aaKnown RBP18.95■□□□□ 0.62
VEGFA-209ENST00000425836 SLC25A6P12236 298 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 HIST1H1BP16401 226 aaKnown RBP18.95■□□□□ 0.62
VEGFA-209ENST00000425836 FAM223AQ8IWN6 122 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 DUX3Q96PT4 197 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 FBXL7Q9UJT9 491 aa18.95■□□□□ 0.62
VEGFA-209ENST00000425836 INMT-MINDY4F8WBC2 141 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 PITX3O75364 302 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 NXPH3O95157 252 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 NDUFB8O95169 186 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 SPNP16150 400 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 MFAP2P55001 183 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 ERHP84090 104 aaKnown RBP18.94■□□□□ 0.62
VEGFA-209ENST00000425836 MARVELD1Q9BSK0 173 aa18.94■□□□□ 0.62
VEGFA-209ENST00000425836 CCL24O00175 119 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 MYCNOSP40205 109 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 HOXA1P49639 335 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-209ENST00000425836 ATP5G2Q06055 141 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 OR1S1Q8NH92 325 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 P2RX4Q99571 388 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 CACFD1Q9UGQ2 172 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 C15orf32Q32M92 178 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 SLC25A24Q6NUK1 477 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 TREML4Q6UXN2 200 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 OR11H1Q8NG94 326 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 ENY2Q9NPA8 101 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 HSPB7Q9UBY9 170 aa18.93■□□□□ 0.62
VEGFA-209ENST00000425836 MPTX1A8MV57 137 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 IFNA21P01568 189 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 PF4P02776 101 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 TNFRSF9Q07011 255 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 ZNF343Q6P1L6 599 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 ZNF114Q8NC26 417 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 OR1N2Q8NGR9 330 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 OR1P1Q8NH06 330 aa18.92■□□□□ 0.62
VEGFA-209ENST00000425836 CEBPZOSA8MTT3 80 aa18.91■□□□□ 0.62
VEGFA-209ENST00000425836 C12orf45Q8N5I9 185 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-209ENST00000425836 CYB5BO43169 146 aa18.9■□□□□ 0.62
VEGFA-209ENST00000425836 PTTG1O95997 202 aa18.9■□□□□ 0.62
VEGFA-209ENST00000425836 DCTN2Q13561 401 aaKnown RBP18.9■□□□□ 0.62
VEGFA-209ENST00000425836 FHL3Q13643 280 aa18.9■□□□□ 0.62
VEGFA-209ENST00000425836 OR1L6Q8NGR2 347 aa18.9■□□□□ 0.62
VEGFA-209ENST00000425836 THYN1Q9P016 225 aa18.9■□□□□ 0.62
VEGFA-209ENST00000425836 SNCAP37840 140 aa18.89■□□□□ 0.62
VEGFA-209ENST00000425836 EXOSC2Q13868 293 aaKnown RBP18.89■□□□□ 0.62
VEGFA-209ENST00000425836 UXS1Q8NBZ7 420 aa18.89■□□□□ 0.62
VEGFA-209ENST00000425836 RBKSQ9H477 322 aa18.89■□□□□ 0.62
VEGFA-209ENST00000425836 ANKRD34BA5PLL1 514 aa18.89■□□□□ 0.61
VEGFA-209ENST00000425836 PRAF2O60831 178 aa18.89■□□□□ 0.61
VEGFA-209ENST00000425836 HSPB1P04792 205 aaKnown RBP18.89■□□□□ 0.61
VEGFA-209ENST00000425836 ZNF616Q08AN1 781 aa18.89■□□□□ 0.61
VEGFA-209ENST00000425836 LINC00482Q8N8I6 264 aa18.89■□□□□ 0.61
VEGFA-209ENST00000425836 GPN1Q9HCN4 374 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-209ENST00000425836 HEYLQ9NQ87 328 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-209ENST00000425836 S4R3C0 116 aa18.89■□□□□ 0.61
VEGFA-209ENST00000425836 IGHV4OR15-8A0A075B7B6 117 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 A0A087WW49 117 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 RNASE2P10153 161 aaKnown RBP18.88■□□□□ 0.61
VEGFA-209ENST00000425836 BSXQ3C1V8 233 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 C11orf87Q6NUJ2 197 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 DPF1Q92782 380 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 OR10C1Q96KK4 312 aa18.88■□□□□ 0.61
VEGFA-209ENST00000425836 VWFP04275 2813 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 MFSD2BA6NFX1 497 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 FAM90A26D6RGX4 464 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 TRBV12-3P01733 135 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 WFDC9Q8NEX5 89 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 DTD1Q8TEA8 209 aa18.87■□□□□ 0.61
VEGFA-209ENST00000425836 RANGRFQ9HD47 186 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-209ENST00000425836 PEF1Q9UBV8 284 aaKnown RBP18.87■□□□□ 0.61
VEGFA-209ENST00000425836 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.86■□□□□ 0.61
VEGFA-209ENST00000425836 SNRPGP15A8MWD9 76 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 LINC01619G3V211 115 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 CCSO14618 274 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 IGHV3-23P01764 117 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 SUB1P53999 127 aaKnown RBP eCLIP18.86■□□□□ 0.61
VEGFA-209ENST00000425836 PVRIGQ6DKI7 326 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 EEF1AKMT3Q96AZ1 226 aa18.86■□□□□ 0.61
VEGFA-209ENST00000425836 CXorf58Q96LI9 332 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms