RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
CCDC12-202ENST00000425441 ZP3P21754 424 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 OR2B8PP59922 312 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 SRPXP78539 464 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 C4orf46Q504U0 113 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 C10orf55Q5SWW7 151 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 TMEM268Q5VZI3 342 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 LFNGQ8NES3 379 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 GRPEL2Q8TAA5 225 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 TMEM56Q96MV1 263 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 MS4A10Q96PG2 267 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
CCDC12-202ENST00000425441 TMEM56-RWDD3S4R434 201 aa10.09□□□□□ -0.79
CCDC12-202ENST00000425441 TRAV3A0A0B4J244 114 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 A0A0G2JLM5 398 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 A0A0G2JRQ6 117 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 C13orf42A0A1B0GVH6 325 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 C9orf170A2RU37 121 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 UPK2O00526 184 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 CNIH1O95406 144 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 PTTG1O95997 202 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 P0C879 139 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 IGHV4-30-4P0DP06 118 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
CCDC12-202ENST00000425441 DHRS2Q13268 280 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 FXYD3Q14802 87 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 ANKRD55Q3KP44 614 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 PLET1Q6UQ28 207 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 H2BFWTQ7Z2G1 175 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 LYG2Q86SG7 212 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 SELENOHQ8IZQ5 122 aaKnown RBP10.08□□□□□ -0.8
CCDC12-202ENST00000425441 LGI3Q8N145 548 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 SLC35G3Q8N808 338 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 DUSP18Q8NEJ0 188 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 OR52B4Q8NGK2 314 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
CCDC12-202ENST00000425441 TENM3Q9P273 2699 aa10.08□□□□□ -0.8
CCDC12-202ENST00000425441 C15orf61A6NNL5 157 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 ACTL6BO94805 426 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 IL6RP08887 468 aaPredicted RBP10.07□□□□□ -0.8
CCDC12-202ENST00000425441 FGF2P09038 288 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 MYOD1P15172 320 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 HLA-GP17693 338 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 MAS1LP35410 378 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
CCDC12-202ENST00000425441 MECP2P51608 486 aaKnown RBP10.07□□□□□ -0.8
CCDC12-202ENST00000425441 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 CADM3Q8N126 398 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 RRNAD1Q96FB5 475 aaKnown RBP10.07□□□□□ -0.8
CCDC12-202ENST00000425441 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 PHB2Q99623 299 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 ZNF355PQ9NSJ1 428 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 SORL1Q92673 2214 aa10.07□□□□□ -0.8
CCDC12-202ENST00000425441 HUWE1Q7Z6Z7 4374 aaKnown RBP10.07□□□□□ -0.8
CCDC12-202ENST00000425441 ELOA3CA0A087WX78 387 aaPredicted RBP10.06□□□□□ -0.8
CCDC12-202ENST00000425441 A0A0B4J2A0 478 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 SNAPC5O75971 98 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 TATDN3Q17R31 274 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 ZFAND6Q6FIF0 208 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 FAM219AQ8IW50 185 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 Q8N1Y9 231 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 LRTM2Q8N967 370 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 COQ8AQ8NI60 647 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 SEC22CQ9BRL7 303 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 SHPKQ9UHJ6 478 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
CCDC12-202ENST00000425441 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 LYZL2Q7Z4W2 148 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 OR4A16Q8NH70 328 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 LSM10Q969L4 123 aaKnown RBP10.05□□□□□ -0.8
CCDC12-202ENST00000425441 COMMD5Q9GZQ3 224 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
CCDC12-202ENST00000425441 A0A1B0GW64 132 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 CGB1A6NKQ9 187 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 DBX1A6NMT0 343 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 TEX22C9J3V5 150 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 INMT-MINDY4F8WBC2 141 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 RBMXL2O75526 392 aaKnown RBP10.04□□□□□ -0.8
CCDC12-202ENST00000425441 BRI3O95415 125 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 APELAP0DMC3 54 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 RGS21Q2M5E4 152 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 LCN12Q6JVE5 192 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 GTSCR1Q86UQ5 136 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 OR9G4Q8NGQ1 327 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 ZNF431Q8TF32 576 aaPredicted RBP10.04□□□□□ -0.8
CCDC12-202ENST00000425441 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 FYTTD1Q96QD9 318 aaKnown RBP10.04□□□□□ -0.8
CCDC12-202ENST00000425441 MARVELD1Q9BSK0 173 aa10.04□□□□□ -0.8
CCDC12-202ENST00000425441 QTRT1Q9BXR0 403 aaKnown RBP10.04□□□□□ -0.8
CCDC12-202ENST00000425441 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms