RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FGF9P31371 208 aaPredicted RBP9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 MFAP2P55001 183 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 LPCAT3Q6P1A2 487 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM17Q86X19 198 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 SLC25A46Q96AG3 418 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DGCR14Q96DF8 476 aaKnown RBP9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 GPHA2Q96T91 129 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NDUFA4L2Q9NRX3 87 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 RHBDL2Q9NX52 303 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ETV7Q9Y603 341 aa9.04□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGHV3-21A0A0B4J1V1 117 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TRAV3A0A0B4J244 114 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CGB1A6NKQ9 187 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 ST8SIA3O43173 380 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TMEM127O75204 238 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 S1PR2O95136 353 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 LPAR6P43657 344 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 NPBWR1P48145 328 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 EIF2B2P49770 351 aaKnown RBP9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 AQP4P55087 323 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CADM3Q8N126 398 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 GBGT1Q8N5D6 347 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR1P1Q8NH06 330 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 MISP3Q96FF7 219 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 RNF2Q99496 336 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 CHRDL1Q9BU40 450 aa9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 TXNL4BQ9NX01 149 aaKnown RBP9.03□□□□□ -0.96
HLA-DQB3-203ENST00000425319 DNAH1Q9P2D7 4330 aa9.02□□□□□ -0.96
HLA-DQB3-203ENST00000425319 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.96
HLA-DQB3-203ENST00000425319 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SMIM30A4D0T7 59 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SSX5O60225 188 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 CTSGP08311 255 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 NPY1RP25929 384 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PSMB9P28065 219 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SNCAP37840 140 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 WT1-ASQ06250 92 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SFXN4Q6P4A7 337 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ZNF773Q6PK81 442 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TCF24Q7RTU0 167 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 OR6F1Q8NGZ6 308 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MOB3AQ96BX8 217 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 S100A16Q96FQ6 103 aaKnown RBP9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 CNBD2Q96M20 576 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 HRH4Q9H3N8 390 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 EHFQ9NZC4 300 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 LYSTQ99698 3801 aa9.02□□□□□ -0.97
HLA-DQB3-203ENST00000425319 CSMD3Q7Z407 3707 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 XRCC3O43542 346 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PGLYRP1O75594 196 aaPredicted RBP9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 NPPCP23582 126 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SUB1P53999 127 aaKnown RBP eCLIP9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TAS2R46P59540 309 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IDNKQ5T6J7 187 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 DHRS11Q6UWP2 260 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 H2BFWTQ7Z2G1 175 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 GVQW1Q8N7I0 195 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 LGALS14Q8TCE9 139 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PINX1Q96BK5 328 aaKnown RBP9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 OR10C1Q96KK4 312 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 RABAC1Q9UI14 185 aa9.01□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ATG12O94817 140 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 RLN1P04808 185 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SPP1P10451 314 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MIFP14174 115 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 GNRHRP30968 328 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 G6PCP35575 357 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 DEFB131AP59861 70 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TSPAN5P62079 268 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 CROCCP3Q8IVE0 287 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 OR5H2Q8NGV7 314 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 GRAMD2BQ96HH9 432 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ZNF2Q9BSG1 426 aaPredicted RBP9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PDCD10Q9BUL8 212 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 NXF2Q9GZY0 626 aaKnown RBP9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 AUNIPQ9H7T9 357 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 NSG2Q9Y328 171 aa9□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IGHV3-49A0A0A0MS15 119 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 K7EIM0 57 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 CORTO00230 105 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 GPR31O00270 319 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 DEFB4AO15263 64 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FCER2P06734 321 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 P0DMU3 169 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 GABARAPL2P60520 117 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MXD1Q05195 221 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TMEM230Q96A57 120 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms