RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SSX2Q16385 188 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 NRGNQ92686 78 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 GGTLC1Q9BX51 225 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 LPAR2Q9HBW0 351 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 PLXNB1O43157 2135 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 EIF3GO75821 320 aaKnown RBP eCLIP21.22■□□□□ 0.99
LDB1-202ENST00000425280 OR13C7P0DN81 318 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 OPRK1P41145 380 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 FGF8P55075 233 aaPredicted RBP21.22■□□□□ 0.99
LDB1-202ENST00000425280 C17orf50Q8WW18 174 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 WNK2Q9Y3S1 2297 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 MAP1LC3B2A6NCE7 125 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 ACTL6BO94805 426 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 M6PRP20645 277 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 RPL27AP46776 148 aaKnown RBP21.22■□□□□ 0.99
LDB1-202ENST00000425280 COMPP49747 757 aaPredicted RBP21.22■□□□□ 0.99
LDB1-202ENST00000425280 LGALS4P56470 323 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 HAGHQ16775 308 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 TEPPQ6URK8 271 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 MAP1LC3BQ9GZQ8 125 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 SLC39A9Q9NUM3 307 aa21.22■□□□□ 0.99
LDB1-202ENST00000425280 UTP20O75691 2785 aaKnown RBP21.22■□□□□ 0.99
LDB1-202ENST00000425280 ASH1LQ9NR48 2969 aaKnown RBP21.21■□□□□ 0.99
LDB1-202ENST00000425280 ACOT6Q3I5F7 207 aaPredicted RBP21.21■□□□□ 0.99
LDB1-202ENST00000425280 PERPQ96FX8 193 aa21.21■□□□□ 0.99
LDB1-202ENST00000425280 SLC25A22Q9H936 323 aa21.21■□□□□ 0.99
LDB1-202ENST00000425280 IGLC7A0M8Q6 106 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 OOSP1A8MZH6 123 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 CD24P25063 80 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 CCDC144NLQ6NUI1 221 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 SVBPQ8N300 66 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 P2RX4Q99571 388 aa21.2■□□□□ 0.99
LDB1-202ENST00000425280 CTXND1A0A1B0GTU2 59 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 SOX15O60248 233 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 MOSP00540 346 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 UBE2E1P51965 193 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 GNB1P62873 340 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 MLANAQ16655 118 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 FAM122CQ6P4D5 195 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 SMDT1Q9H4I9 107 aa21.2■□□□□ 0.98
LDB1-202ENST00000425280 IGHV4-30-2A0A087WSY4 118 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 YIF1AO95070 293 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 CD69Q07108 199 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 MMDQ15546 238 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 FBLN7Q53RD9 439 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 MIC13Q5XKP0 118 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 EAF1Q96JC9 268 aaPredicted RBP21.19■□□□□ 0.98
LDB1-202ENST00000425280 ACTR3CQ9C0K3 210 aaPredicted RBP21.19■□□□□ 0.98
LDB1-202ENST00000425280 PXMP4Q9Y6I8 212 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 FCN1O00602 326 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 REG1AP05451 166 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 SSBP2P81877 361 aaPredicted RBP21.19■□□□□ 0.98
LDB1-202ENST00000425280 GAMTQ14353 236 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 ICAM4Q14773 271 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 GCSAMLQ5JQS6 135 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 ZNF506Q5JVG8 444 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 SLC35B3Q9H1N7 401 aa21.19■□□□□ 0.98
LDB1-202ENST00000425280 TBL2Q9Y4P3 447 aaKnown RBP21.19■□□□□ 0.98
LDB1-202ENST00000425280 SUB1P53999 127 aaKnown RBP eCLIP21.18■□□□□ 0.98
LDB1-202ENST00000425280 PLGLAQ15195 96 aa21.18■□□□□ 0.98
LDB1-202ENST00000425280 TMEM144Q7Z5S9 345 aa21.18■□□□□ 0.98
LDB1-202ENST00000425280 NPBQ8NG41 125 aa21.18■□□□□ 0.98
LDB1-202ENST00000425280 SSMEM1Q8WWF3 244 aa21.18■□□□□ 0.98
LDB1-202ENST00000425280 GNG13Q9P2W3 67 aa21.18■□□□□ 0.98
LDB1-202ENST00000425280 NBR2O15453 112 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 SNRNP70P08621 437 aaKnown RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 DEFA4P12838 97 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 RAB24Q969Q5 203 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 NAV3Q8IVL0 2385 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 HMGB3O15347 200 aaKnown RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 CYB5BO43169 146 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 GPX4P36969 197 aaPredicted RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 MRPL41Q8IXM3 137 aaKnown RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 RNASEH2CQ8TDP1 164 aaKnown RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 CACNG8Q8WXS5 425 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 NKX6-2Q9C056 277 aaPredicted RBP21.17■□□□□ 0.98
LDB1-202ENST00000425280 KCNIP2Q9NS61 270 aa21.17■□□□□ 0.98
LDB1-202ENST00000425280 FAM208BQ5VWN6 2430 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 NDUFA3O95167 84 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 AREGP15514 252 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 PAX1P15863 534 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 RAB31Q13636 194 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 HES1Q14469 280 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 SLC16A13Q7RTY0 426 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 OR2T10Q8NGZ9 312 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 AJUBAQ96IF1 538 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 ABCA2Q9BZC7 2435 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 LOC102723971A0A1B0GUV8 181 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 SEC14L6B5MCN3 397 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 TEX22C9J3V5 150 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 BTN1A1Q13410 526 aa21.16■□□□□ 0.98
LDB1-202ENST00000425280 IGKV1OR2-108A0A075B7D4 117 aa21.15■□□□□ 0.98
LDB1-202ENST00000425280 CDC34P49427 236 aaPredicted RBP21.15■□□□□ 0.98
LDB1-202ENST00000425280 PAX8Q06710 450 aa21.15■□□□□ 0.98
LDB1-202ENST00000425280 RXFP4Q8TDU9 374 aa21.15■□□□□ 0.98
LDB1-202ENST00000425280 SPG11Q96JI7 2443 aa21.15■□□□□ 0.98
LDB1-202ENST00000425280 LRRK2Q5S007 2527 aa21.15■□□□□ 0.98
LDB1-202ENST00000425280 ZFP92A6NM28 416 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 APELAP0DMC3 54 aa21.14■□□□□ 0.98
LDB1-202ENST00000425280 RPL29P47914 159 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms