RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 IGHV3-49A0A0A0MS15 119 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 DEFB131AP59861 70 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 MLLT11Q13015 90 aaPredicted RBP12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 OR1L8Q8NGR8 309 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 X6R8D5 127 aa12.09□□□□□ -0.47
CHCHD3-202ENST00000423635 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 SULT1C2O00338 296 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 NUPL2O15504 423 aaKnown RBP12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 LEMD1Q68G75 181 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 SECTM1Q8WVN6 248 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 LSM10Q969L4 123 aaKnown RBP12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
CHCHD3-202ENST00000423635 LRP1BQ9NZR2 4599 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 YIF1AO95070 293 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 CATR1Q13166 79 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 MORN3Q6PF18 240 aaPredicted RBP12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 Q6ZR54 194 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 STHQ8IWL8 128 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 TXN2Q99757 166 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 NXF2Q9GZY0 626 aaKnown RBP12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 VSIRQ9H7M9 311 aa12.07□□□□□ -0.48
CHCHD3-202ENST00000423635 HERC1Q15751 4861 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 SSX5O60225 188 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 SPP1P10451 314 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 FCGR2CP31995 323 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 CADM3Q8N126 398 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 LILRB2Q8N423 598 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 DUSP18Q8NEJ0 188 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 OR13F1Q8NGS4 319 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
CHCHD3-202ENST00000423635 TMEM235A6NFC5 223 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 PPYP01298 95 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 RAB3BP20337 219 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 MFAP4P55083 255 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 CSNK1G2-AS1Q8NCQ2 148 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 MGLLQ99685 303 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
CHCHD3-202ENST00000423635 I3L2K1 104 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 GNG2P59768 71 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 ST8SIA2Q92186 375 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 SLC5A7Q9GZV3 580 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
CHCHD3-202ENST00000423635 MARCH11A6NNE9 402 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 CD74P04233 296 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 EIF4EP06730 217 aaKnown RBP12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 GINS3Q9BRX5 216 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 HINT2Q9BX68 163 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 TBC1D24Q9ULP9 559 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 OR51B2Q9Y5P1 312 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 AGRNO00468 2067 aa12.03□□□□□ -0.48
CHCHD3-202ENST00000423635 SCGNO76038 276 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 PTHLHP12272 177 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 C4BPBP20851 252 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 ARPC4P59998 168 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 ERVK-16P61578 105 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 RCN1Q15293 331 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 SOHLH1Q5JUK2 328 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 TOMM20LQ6UXN7 152 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 OR51H1Q8NH63 302 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 TMEM14BQ9NUH8 114 aa12.02□□□□□ -0.49
CHCHD3-202ENST00000423635 IFNA10P01566 189 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 MYL9P24844 172 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 Q6ZRM9 215 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 ZNF767PQ75MW2 155 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 FKBP11Q9NYL4 201 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 NSG2Q9Y328 171 aa12.01□□□□□ -0.49
CHCHD3-202ENST00000423635 TRDV1A0A1B0GX56 115 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 K7EQG2 157 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 RGS10O43665 173 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 SNAPC5O75971 98 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 IFNA21P01568 189 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms