RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 VN1R17PQ8TDU5 208 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 DGCR14Q96DF8 476 aaKnown RBP5.94□□□□□ -1.46
VIM-202ENST00000421459 SLC25A38Q96DW6 304 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 GALNT14Q96FL9 552 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 RARRES2Q99969 163 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 FUNDC2Q9BWH2 189 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 CSTL1Q9H114 145 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 DAZ1Q9NQZ3 744 aaKnown RBP5.94□□□□□ -1.46
VIM-202ENST00000421459 RHBDL2Q9NX52 303 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 C21orf62Q9NYP8 219 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 SMPXQ9UHP9 88 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 IGHV3-66A0A0C4DH42 116 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 OR4C46A6NHA9 309 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 NDUFA4O00483 81 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 CHEK1O14757 476 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 APOHP02749 345 aaPredicted RBP5.93□□□□□ -1.46
VIM-202ENST00000421459 CTSGP08311 255 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 ATF4P18848 351 aaPredicted RBP5.93□□□□□ -1.46
VIM-202ENST00000421459 SDC2P34741 201 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 G6PCP35575 357 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 LPAR6P43657 344 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 ARL6IP1Q15041 203 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 CTF1Q16619 201 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 POU2AF1Q16633 256 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 AADACL3Q5VUY0 350 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 SFXN4Q6P4A7 337 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 HOGA1Q86XE5 327 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 CLVS1Q8IUQ0 354 aaPredicted RBP5.93□□□□□ -1.46
VIM-202ENST00000421459 FAM24BQ8N5W8 94 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 C11orf45Q8TAV5 145 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 RAB2BQ8WUD1 216 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 BSCL2Q96G97 398 aaPredicted RBP5.93□□□□□ -1.46
VIM-202ENST00000421459 RHPN1-AS1Q9BWJ2 59 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 NDUFA4L2Q9NRX3 87 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 THYN1Q9P016 225 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 ETV7Q9Y603 341 aa5.93□□□□□ -1.46
VIM-202ENST00000421459 F11RQ9Y624 299 aaKnown RBP5.93□□□□□ -1.46
VIM-202ENST00000421459 IGHV7-4-1A0A0J9YVY3 117 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 MPTX1A8MV57 137 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 H3BMQ9 156 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 K7EMT4 169 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 RBFOX2O43251 390 aaKnown RBP eCLIP5.92□□□□□ -1.46
VIM-202ENST00000421459 PGLYRP1O75594 196 aaPredicted RBP5.92□□□□□ -1.46
VIM-202ENST00000421459 YIF1AO95070 293 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 KRASP01116 189 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 RLN1P04808 185 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 GNRHRP30968 328 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 RFX2P48378 723 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 RBMS2Q15434 407 aaKnown RBP5.92□□□□□ -1.46
VIM-202ENST00000421459 IDNKQ5T6J7 187 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 GPR107Q5VW38 600 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 TMEM217Q8N7C4 229 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 TMEM116Q8NCL8 245 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 ZBTB34Q8NCN2 500 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 OR1L8Q8NGR8 309 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 GIMAP1Q8WWP7 306 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 FCAMRQ8WWV6 532 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 NAA50Q9GZZ1 169 aaKnown RBP5.92□□□□□ -1.46
VIM-202ENST00000421459 PLEKHA2Q9HB19 425 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 RSL24D1Q9UHA3 163 aaKnown RBP5.92□□□□□ -1.46
VIM-202ENST00000421459 OR51B2Q9Y5P1 312 aa5.92□□□□□ -1.46
VIM-202ENST00000421459 MARCH11A6NNE9 402 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 C15orf62A8K5M9 175 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 IGLL5B9A064 214 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 NUPL2O15504 423 aaKnown RBP5.91□□□□□ -1.46
VIM-202ENST00000421459 XRCC3O43542 346 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 CA1P00915 261 aaPredicted RBP5.91□□□□□ -1.46
VIM-202ENST00000421459 PMP2P02689 132 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 IFNA4P05014 189 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 FGF9P31371 208 aaPredicted RBP5.91□□□□□ -1.46
VIM-202ENST00000421459 CATR1Q13166 79 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 MSMO1Q15800 293 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 FAM90A2PQ658T7 463 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 OR5AP2Q8NGF4 316 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 GATAD1Q8WUU5 269 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 ST8SIA2Q92186 375 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 SLC25A46Q96AG3 418 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 MISP3Q96FF7 219 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 SRSF8Q9BRL6 282 aaKnown RBP5.91□□□□□ -1.46
VIM-202ENST00000421459 AIFM2Q9BRQ8 373 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 AUNIPQ9H7T9 357 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 APLNQ9ULZ1 77 aa5.91□□□□□ -1.46
VIM-202ENST00000421459 I3L2K1 104 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 SCGNO76038 276 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 DFFBO76075 338 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.46
VIM-202ENST00000421459 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.46
VIM-202ENST00000421459 RBMY1CP0DJD4 496 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 F2RP25116 425 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 TGFBR1P36897 503 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 DEFB131AP59861 70 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 ERVK-16P61578 105 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 RBMY1FQ15415 496 aaKnown RBP5.9□□□□□ -1.46
VIM-202ENST00000421459 IZUMO4Q1ZYL8 232 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 CNPY1Q3B7I2 92 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 SPINK9Q5DT21 86 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 TCF24Q7RTU0 167 aa5.9□□□□□ -1.46
VIM-202ENST00000421459 TPRA1Q86W33 373 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms