RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 AMMECR1LQ6DCA0 310 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 DHRS11Q6UWP2 260 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM219Q86XT9 240 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CACNG8Q8WXS5 425 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CDC42EP3Q9UKI2 254 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 ARL14EPLP0DKL9 152 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 RND3P61587 244 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CX3CL1P78423 397 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TEX45Q8NA69 505 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 OR11H7Q8NGC8 314 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF207O43670 478 aaKnown RBP8.93□□□□□ -0.98
PTCH1-206ENST00000421141 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TEX38Q6PEX7 206 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 OR2D3Q8NGH3 330 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TP53RKQ96S44 253 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TMSB15BA0A087X1C1 80 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 B4DEV8 164 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 COL8A2P25067 703 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 RHOGP84095 191 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM18Q96B42 140 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 SLX1AQ9BQ83 275 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 NPDC1Q9NQX5 325 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-206ENST00000421141 COL4A3Q01955 1670 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 ANKHD1Q8IWZ3 2542 aaKnown RBP8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CEACAM4O75871 244 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 COX19Q49B96 90 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 ARTNQ5T4W7 220 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 PLPPR1Q8TBJ4 325 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 TXNDC17Q9BRA2 123 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-66A0A0C4DH42 116 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CD74P04233 296 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 SPSB4Q96A44 273 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 CLDN34H7C241 214 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TNFSF13O75888 250 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM252Q8N6L7 170 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
PTCH1-206ENST00000421141 RGP1Q92546 391 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-206ENST00000421141 CSPG4Q6UVK1 2322 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TRBV6-7A0A0A0MS04 114 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 PGPA6NDG6 321 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 PLA2G10O15496 165 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM97Q5BJF2 176 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 RPRMQ9NS64 109 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF257Q9Y2Q1 563 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TRAV41A0A0B4J266 112 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 BRD3OSQ6XYD6 125 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 A8MWL6 223 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 MELTFP08582 738 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 BSXQ3C1V8 233 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 TPTE2P1Q5T6R2 138 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF343Q6P1L6 599 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 NEUROG1Q92886 237 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 SRD5A3Q9H8P0 318 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 LY6HO94772 140 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 S4R3C0 116 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 KLRD1Q13241 179 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 SRSF7Q16629 238 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTCH1-206ENST00000421141 DUX3Q96PT4 197 aa8.92□□□□□ -0.98
PTCH1-206ENST00000421141 AREGP15514 252 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 CLLU1Q5K131 121 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM116Q8NCL8 245 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM167AQ8TBQ9 72 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 A0A087WV48 116 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 SAP30O75446 220 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 HIST1H3AP68431 136 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 MUC22E2RYF6 1773 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-206ENST00000421141 A0A0B4J293 547 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 C15orf61A6NNL5 157 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 SNRPCP09234 159 aaKnown RBP8.91□□□□□ -0.98
PTCH1-206ENST00000421141 UQCRFS1P47985 274 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 DEFB121Q5J5C9 76 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 SLC25A48Q6ZT89 311 aaKnown RBP8.91□□□□□ -0.98
PTCH1-206ENST00000421141 RPRMLQ8N4K4 120 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 MYOZ3Q8TDC0 251 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 BUB1B-PAK6H3BSN5 160 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 TCF21O43680 179 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 CD5P06127 495 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 IFI27L2Q9H2X8 130 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 SAA4P35542 130 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 OR5AC2Q9NZP5 309 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 PDZD11Q5EBL8 140 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
PTCH1-206ENST00000421141 HERVK_113P61574 105 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM88Q6PEY1 159 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 PNRC2Q9NPJ4 139 aaKnown RBP8.9□□□□□ -0.98
PTCH1-206ENST00000421141 KRTDAPP60985 99 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF705AQ6ZN79 300 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-206ENST00000421141 GATAD1Q8WUU5 269 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3OR16-13A0A075B7E8 117 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-74A0A0B4J1X5 117 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 IGKV1-9A0A0C4DH69 117 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 J3QRE1 110 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 OR5AL1P0C617 328 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 PAX8Q06710 450 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 IGFL2Q6UWQ7 119 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms