RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TSC22D3Q99576 134 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 HINT2Q9BX68 163 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 TP53TG1Q9Y2A0 90 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 K7EIM0 57 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 K7EMT4 169 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 APOC4P55056 127 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 LPCAT3Q6P1A2 487 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 Q6ZWC4 215 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
MSH6-203ENST00000420813 TMEM14BQ9NUH8 114 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 NSG2Q9Y328 171 aa12.92□□□□□ -0.34
MSH6-203ENST00000420813 ALMS1Q8TCU4 4167 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 C15orf61A6NNL5 157 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
MSH6-203ENST00000420813 NOL3O60936 208 aaKnown RBP12.91□□□□□ -0.34
MSH6-203ENST00000420813 S100GP29377 79 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 HRH1P35367 487 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 LYSMD2Q8IV50 215 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 GPX8Q8TED1 209 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
MSH6-203ENST00000420813 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 UBE2CO00762 179 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 ADMP35318 185 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 LSM3P62310 102 aaKnown RBP12.9□□□□□ -0.34
MSH6-203ENST00000420813 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 SLC25A46Q96AG3 418 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
MSH6-203ENST00000420813 IGHV3-21A0A0B4J1V1 117 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 KIR2DL5BA0A0G2JN68 375 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 KIR2DL5BA0A0G2JPC4 375 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 APOA1P02647 267 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 BMI1P35226 326 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 TSPAN5P62079 268 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 TNFRSF9Q07011 255 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 Q56UQ5 140 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 KIR2DL5AQ8N109 375 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 KIR2DL5BQ8NHK3 375 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 SCPEP1Q9HB40 452 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
MSH6-203ENST00000420813 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 ZNF701M0R085 212 aaPredicted RBP12.88□□□□□ -0.35
MSH6-203ENST00000420813 SPRY2O43597 315 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 EIF4EP06730 217 aaKnown RBP12.88□□□□□ -0.35
MSH6-203ENST00000420813 CTSGP08311 255 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
MSH6-203ENST00000420813 UCP3P55916 312 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
MSH6-203ENST00000420813 ZNF114Q8NC26 417 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
MSH6-203ENST00000420813 NUPL2O15504 423 aaKnown RBP12.87□□□□□ -0.35
MSH6-203ENST00000420813 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
MSH6-203ENST00000420813 RCVRNP35243 200 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 DEFB135Q30KP9 77 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 TBC1D26Q86UD7 250 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 TXN2Q99757 166 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
MSH6-203ENST00000420813 SMPXQ9UHP9 88 aa12.87□□□□□ -0.35
MSH6-203ENST00000420813 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 A0A0J9YWU9 116 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 NUPR2A6NF83 97 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 I3L2K1 104 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
MSH6-203ENST00000420813 CTSDP07339 412 aaPredicted RBP12.86□□□□□ -0.35
MSH6-203ENST00000420813 MFAP4P55083 255 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 PRCDQ00LT1 54 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 CLVS1Q8IUQ0 354 aaPredicted RBP12.86□□□□□ -0.35
MSH6-203ENST00000420813 STPG3Q8N7X2 389 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 OR4A16Q8NH70 328 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 LINC00476Q8WZB0 136 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 RNF183Q96D59 192 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 OR10C1Q96KK4 312 aa12.86□□□□□ -0.35
MSH6-203ENST00000420813 IGHV7-4-1A0A0J9YVY3 117 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 CXorf65A6NEN9 183 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 BCL7BQ9BQE9 202 aa12.85□□□□□ -0.35
MSH6-203ENST00000420813 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
MSH6-203ENST00000420813 CHEK1O14757 476 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
MSH6-203ENST00000420813 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
MSH6-203ENST00000420813 CNPY1Q3B7I2 92 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 RAB2BQ8WUD1 216 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 MRGPRFQ96AM1 343 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 RNF2Q99496 336 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms