RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 PALMDQ9NP74 551 aa12.44□□□□□ -0.42
LINC00404-201ENST00000418660 COPZ2Q9P299 210 aa12.44□□□□□ -0.42
LINC00404-201ENST00000418660 H3BMQ9 156 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 HSPE1P61604 102 aaKnown RBP12.43□□□□□ -0.42
LINC00404-201ENST00000418660 PRCDQ00LT1 54 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 IL18Q14116 193 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 OR1P1Q8NH06 330 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 MARCH1Q8TCQ1 289 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 SCARB1Q8WTV0 552 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 CACNG8Q8WXS5 425 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 TM2D3Q9BRN9 247 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
LINC00404-201ENST00000418660 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 SLC2A8Q9NY64 477 aa12.43□□□□□ -0.42
LINC00404-201ENST00000418660 ATG12O94817 140 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 CTSDP07339 412 aaPredicted RBP12.42□□□□□ -0.42
LINC00404-201ENST00000418660 ELLP55199 621 aaPredicted RBP12.42□□□□□ -0.42
LINC00404-201ENST00000418660 CD81P60033 236 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 TM4SF20Q53R12 229 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 SPSB3Q6PJ21 355 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 UNQ9165/PRO28630Q6UXU0 137 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 MARC2Q969Z3 335 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 ISOC1Q96CN7 298 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 BSCL2Q96G97 398 aaPredicted RBP12.42□□□□□ -0.42
LINC00404-201ENST00000418660 NEURL2Q9BR09 285 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 SLIRPQ9GZT3 109 aaKnown RBP12.42□□□□□ -0.42
LINC00404-201ENST00000418660 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
LINC00404-201ENST00000418660 C21orf62Q9NYP8 219 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 UFC1Q9Y3C8 167 aa12.42□□□□□ -0.42
LINC00404-201ENST00000418660 IGHV3-21A0A0B4J1V1 117 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 IGHV3-35A0A0C4DH35 117 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 OR2T8A6NH00 312 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 DISC1C4P0D8 188 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 K7EIM0 57 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 B3GALNT1O75752 331 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 P0C879 139 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 AKAIN1P0CW23 69 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 C8orf88P0DMB2 117 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 GUCA2BQ16661 112 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 SP6Q3SY56 376 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 ZNF57Q68EA5 555 aaPredicted RBP12.41□□□□□ -0.42
LINC00404-201ENST00000418660 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 WDR89Q96FK6 387 aaPredicted RBP12.41□□□□□ -0.42
LINC00404-201ENST00000418660 MRPL27Q9P0M9 148 aaKnown RBP12.41□□□□□ -0.42
LINC00404-201ENST00000418660 MLXQ9UH92 298 aa12.41□□□□□ -0.42
LINC00404-201ENST00000418660 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 CD7P09564 240 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 UCP1P25874 307 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 AKR1C2P52895 323 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 SURF2Q15527 256 aaPredicted RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 TRIM16LQ309B1 348 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 TMEM190Q8WZ59 177 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
LINC00404-201ENST00000418660 RSL24D1Q9UHA3 163 aaKnown RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 C14orf166Q9Y224 244 aaKnown RBP12.4□□□□□ -0.42
LINC00404-201ENST00000418660 A0A0B4J293 547 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 TNFSF8P32971 234 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 HAGHQ16775 308 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 Q56UQ5 140 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 MCFD2Q8NI22 146 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 MISP3Q96FF7 219 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 SOSTQ9BQB4 213 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
LINC00404-201ENST00000418660 CHRDL1Q9BU40 450 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 GAR1Q9NY12 217 aaKnown RBP12.39□□□□□ -0.43
LINC00404-201ENST00000418660 CEPT1Q9Y6K0 416 aa12.39□□□□□ -0.43
LINC00404-201ENST00000418660 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 INS-IGF2F8WCM5 200 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 I3L2K1 104 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 NDUFA4O00483 81 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 ADMP35318 185 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 LINC00322Q6ZN03 302 aaPredicted RBP12.38□□□□□ -0.43
LINC00404-201ENST00000418660 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
LINC00404-201ENST00000418660 TXN2Q99757 166 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 PRRT1Q99946 306 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 GPR132Q9UNW8 380 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 SELENOKQ9Y6D0 94 aa12.38□□□□□ -0.43
LINC00404-201ENST00000418660 HUWE1Q7Z6Z7 4374 aaKnown RBP12.37□□□□□ -0.43
LINC00404-201ENST00000418660 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
LINC00404-201ENST00000418660 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
LINC00404-201ENST00000418660 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
LINC00404-201ENST00000418660 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
LINC00404-201ENST00000418660 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms