RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 DEFA4P12838 97 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 IGLL1P15814 213 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 ANXA7P20073 488 aaKnown RBP9.63□□□□□ -0.87
SKA1-203ENST00000417656 SLURP1P55000 103 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
SKA1-203ENST00000417656 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 ANKRD55Q3KP44 614 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 ZNF429Q86V71 674 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 LGI3Q8N145 548 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 DPF1Q92782 380 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 USMG5Q96IX5 58 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 PDCD10Q9BUL8 212 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 FBXL7Q9UJT9 491 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 DMRT1Q9Y5R6 373 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 S4R3C0 116 aa9.63□□□□□ -0.87
SKA1-203ENST00000417656 A0A0B4J2A0 478 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 LINC01619G3V211 115 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 NXPH3O95157 252 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 NDUFB8O95169 186 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 IFNA17P01571 189 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 IGHV3-23P01764 117 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 HLA-AP01891 365 aaKnown RBP9.62□□□□□ -0.87
SKA1-203ENST00000417656 HIST1H1BP16401 226 aaKnown RBP9.62□□□□□ -0.87
SKA1-203ENST00000417656 HOXA1P49639 335 aaPredicted RBP9.62□□□□□ -0.87
SKA1-203ENST00000417656 UBE2MP61081 183 aaKnown RBP9.62□□□□□ -0.87
SKA1-203ENST00000417656 IFITM3Q01628 133 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 ATP5G2Q06055 141 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 ASAH1Q13510 395 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 NMSQ5H8A3 153 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 ZNF343Q6P1L6 599 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 WFDC9Q8NEX5 89 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 SHPKQ9UHJ6 478 aa9.62□□□□□ -0.87
SKA1-203ENST00000417656 F11RQ9Y624 299 aaKnown RBP9.62□□□□□ -0.87
SKA1-203ENST00000417656 MFSD2BA6NFX1 497 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 HSPB1P04792 205 aaKnown RBP9.61□□□□□ -0.87
SKA1-203ENST00000417656 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 MFAP2P55001 183 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 KLK9Q2XQG4 91 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 RCC1LQ96I51 464 aaKnown RBP9.61□□□□□ -0.87
SKA1-203ENST00000417656 NUDT15Q9NV35 164 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 KLK9Q9UKQ9 250 aa9.61□□□□□ -0.87
SKA1-203ENST00000417656 TRAV6A0A075B6T7 132 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 C9orf170A2RU37 121 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 TCRBP04435 133 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 OR4E1P0C645 316 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
SKA1-203ENST00000417656 DHRS2Q13268 280 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 C4orf46Q504U0 113 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 MZT2BQ6NZ67 158 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 LYG2Q86SG7 212 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 LRTM2Q8N967 370 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 DCUN1D4Q92564 292 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
SKA1-203ENST00000417656 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
SKA1-203ENST00000417656 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
SKA1-203ENST00000417656 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.6□□□□□ -0.87
SKA1-203ENST00000417656 PEF1Q9UBV8 284 aaKnown RBP9.6□□□□□ -0.87
SKA1-203ENST00000417656 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.59□□□□□ -0.87
SKA1-203ENST00000417656 FAM240BA0A1B0GVZ2 78 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 BMPR1BO00238 502 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 CYB5BO43169 146 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 SPCS3P61009 180 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 SLC25A24Q6NUK1 477 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 ZNF114Q8NC26 417 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 OR52B4Q8NGK2 314 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 ENKURQ8TC29 256 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 ENY2Q9NPA8 101 aa9.59□□□□□ -0.87
SKA1-203ENST00000417656 IGHV3-21A0A0B4J1V1 117 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 CEBPZOSA8MTT3 80 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 OVOL1O14753 267 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 DUS4LO95620 317 aaKnown RBP9.58□□□□□ -0.88
SKA1-203ENST00000417656 HOXB5P09067 269 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 ZP3P21754 424 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
SKA1-203ENST00000417656 BEAN1Q3B7T3 259 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 CLEC19AQ6UXS0 136 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 ZNF502Q8TBZ5 544 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 MCRIP2Q9BUT9 160 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms