RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
RFFL-205ENST00000415395 CTSZQ9UBR2 303 aa9.47□□□□□ -0.89
RFFL-205ENST00000415395 FUT9Q9Y231 359 aa9.47□□□□□ -0.89
RFFL-205ENST00000415395 C17orf98A8MV24 154 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 RBFOX2O43251 390 aaKnown RBP eCLIP9.46□□□□□ -0.89
RFFL-205ENST00000415395 CXorf1O96002 111 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 GPR12P47775 334 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 RPL30P62888 115 aaKnown RBP9.46□□□□□ -0.89
RFFL-205ENST00000415395 RAB31Q13636 194 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 PDLIM3Q53GG5 364 aaPredicted RBP9.46□□□□□ -0.89
RFFL-205ENST00000415395 LYPD2Q6UXB3 125 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.89
RFFL-205ENST00000415395 ZNF714Q96N38 554 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.89
RFFL-205ENST00000415395 ZFYVE26Q68DK2 2539 aa9.46□□□□□ -0.9
RFFL-205ENST00000415395 IGHV3-43A0A0B4J1X8 118 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 ZNF705GA8MUZ8 300 aaPredicted RBP9.45□□□□□ -0.9
RFFL-205ENST00000415395 HMGB3O15347 200 aaKnown RBP9.45□□□□□ -0.9
RFFL-205ENST00000415395 FCN3O75636 299 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 IGHV3-43DP0DP04 118 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 EFNA4P52798 201 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 SSX2Q16385 188 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 PRAMEF5Q5TYX0 476 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 CST9LP1Q5W188 147 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 RPUSD1Q9UJJ7 312 aaKnown RBP9.45□□□□□ -0.9
RFFL-205ENST00000415395 DOCK11Q5JSL3 2073 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 C15orf62A8K5M9 175 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 A8MWP6 167 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 OVOL3O00110 214 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 OR8B3Q8NGG8 313 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 TMEM37Q8WXS4 190 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
RFFL-205ENST00000415395 OR8B2Q96RD0 313 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 RALYQ9UKM9 306 aaKnown RBP9.45□□□□□ -0.9
RFFL-205ENST00000415395 PSG11Q9UQ72 335 aa9.45□□□□□ -0.9
RFFL-205ENST00000415395 ZNF462Q96JM2 2506 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 A0A0U1RQK1 487 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ZNF320A2RRD8 509 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ST8SIA5O15466 376 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 FOSL1P15407 271 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 IL3RAP26951 378 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 USF2Q15853 346 aaPredicted RBP9.44□□□□□ -0.9
RFFL-205ENST00000415395 LTC4SQ16873 150 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 C8orf31Q8N9H6 132 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 IGFBPL1Q8WX77 278 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 SFRP2Q96HF1 295 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 UHRF2Q96PU4 802 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ELOVL1Q9BW60 279 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 HEYLQ9NQ87 328 aaPredicted RBP9.44□□□□□ -0.9
RFFL-205ENST00000415395 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 ARL2-SNX15V9GYD0 113 aa9.44□□□□□ -0.9
RFFL-205ENST00000415395 UBR5O95071 2799 aaPredicted RBP9.44□□□□□ -0.9
RFFL-205ENST00000415395 RBP4P02753 201 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 RNF224P0DH78 156 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 CHRNA7P36544 502 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 BTNL3Q6UXE8 466 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 TMEM144Q7Z5S9 345 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
RFFL-205ENST00000415395 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
RFFL-205ENST00000415395 IFI27L2Q9H2X8 130 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 ENY2Q9NPA8 101 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 FKBP11Q9NYL4 201 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
RFFL-205ENST00000415395 YLPM1P49750 1951 aaKnown RBP9.43□□□□□ -0.9
RFFL-205ENST00000415395 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 OR10J1P30954 320 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 CDKN1AP38936 164 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 DLX6P56179 175 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 RHOBP62745 196 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 GNB1P62873 340 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 COX19Q49B96 90 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 FAM53AQ6NSI3 398 aaPredicted RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 OR5T1Q8NG75 326 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 OR10G8Q8NGN5 311 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 GATAD1Q8WUU5 269 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 C5orf30Q96GV9 206 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 NPVFQ9HCQ7 196 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 LRBAP50851 2863 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 FLNCQ14315 2725 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 MYO18BQ8IUG5 2567 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 USP9XQ93008 2570 aaPredicted RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 TRBV9A0A0B4J1U6 114 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 A0A1B0GV90 55 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 FNDC10F2Z333 226 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 NDUFB4O95168 129 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms