RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 GPR12P47775 334 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 LINC00205P59089 165 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 PRB3Q04118 309 aaPredicted RBP8.04□□□□□ -1.12
DDB1-202ENST00000414411 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 KHDC3LQ587J8 217 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 OR8G2PQ6IF36 304 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 ABHD12Q8N2K0 398 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 DTD1Q8TEA8 209 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 MBD3L1Q8WWY6 194 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 TAF15Q92804 592 aaKnown RBP eCLIP8.04□□□□□ -1.12
DDB1-202ENST00000414411 LEAP2Q969E1 77 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 RCC1LQ96I51 464 aaKnown RBP8.04□□□□□ -1.12
DDB1-202ENST00000414411 SMR3AQ99954 134 aa8.04□□□□□ -1.12
DDB1-202ENST00000414411 PUS1Q9Y606 427 aaKnown RBP eCLIP8.04□□□□□ -1.12
DDB1-202ENST00000414411 TEP1Q99973 2627 aaKnown RBP8.04□□□□□ -1.12
DDB1-202ENST00000414411 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
DDB1-202ENST00000414411 CENPVL3A0A0U1RRI6 287 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 LOC102723971A0A1B0GUV8 181 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 PROP1O75360 226 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 RNF212Q495C1 297 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 CT45A1Q5HYN5 189 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 SSX7Q7RTT5 188 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 PNKDQ8N490 385 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 LINC00311Q8N616 119 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 CT45A3Q8NHU0 189 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 PINX1Q96BK5 328 aaKnown RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 CIB3Q96Q77 187 aaPredicted RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 TIMM9Q9Y5J7 89 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 PMS2P5A8MQ11 134 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 ODF3BA8MYP8 253 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 H3BQ15 152 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 J3QR06 171 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 SLC31A2O15432 143 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 LY6G6DO95868 133 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 FSHBP01225 129 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 FBP1P09467 338 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 BCL2P10415 239 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 UBE2E1P51965 193 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 KLRD1Q13241 179 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 ATP6V1FQ16864 119 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 KLF17Q5JT82 389 aaPredicted RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 CENPVQ7Z7K6 275 aaPredicted RBP8.03□□□□□ -1.12
DDB1-202ENST00000414411 BEND2Q8NDZ0 799 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 OR10G4Q8NGN3 311 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 OR13D1Q8NGV5 346 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 OR9G1Q8NH87 305 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 LHX4Q969G2 390 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 R3HDM4Q96D70 268 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 TMEM147Q9BVK8 224 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 CLEC7AQ9BXN2 247 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 IFI27L2Q9H2X8 130 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 BIN3Q9NQY0 253 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
DDB1-202ENST00000414411 RBMXL2O75526 392 aaKnown RBP8.02□□□□□ -1.13
DDB1-202ENST00000414411 ARG1P05089 322 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 COX7A1P24310 79 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
DDB1-202ENST00000414411 CEBPGP53567 150 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
DDB1-202ENST00000414411 RAB5BP61020 215 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 B2MP61769 119 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 ZFP82Q8N141 532 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 C2CD4CQ8TF44 421 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 AJUBAQ96IF1 538 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 ZNRD1Q9P1U0 126 aa8.02□□□□□ -1.13
DDB1-202ENST00000414411 A0A1W2PPE3 182 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 ZFP92A6NM28 416 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 FAM90A9PA6NNJ1 464 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 CEBPZOSA8MTT3 80 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 M0R1X1 148 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 RBFOX2O43251 390 aaKnown RBP eCLIP8.01□□□□□ -1.13
DDB1-202ENST00000414411 FCGR3BO75015 233 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 HPRT1P00492 218 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 OR9G9P0C7N8 305 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 IGHV4-38-2P0DP08 117 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 PRRX1P54821 245 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 HLA-DRB5Q30154 266 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 LDLRAD2Q5SZI1 272 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 ZNF429Q86V71 674 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 OR10P1Q8NGE3 313 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 OR4P4Q8NGL7 312 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 ST6GALNAC6Q969X2 333 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 YPEL4Q96NS1 127 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 NIPSNAP3BQ9BS92 247 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 A0A087WWC5 75 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 IGHV1-69DA0A0B4J2H0 117 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
DDB1-202ENST00000414411 LY6LH3BQJ8 138 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms