RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 DTD1Q8TEA8 209 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 QTRT1Q9BXR0 403 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 TSSC4Q9Y5U2 329 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 TCRBV4S1A1TA0A5B7 111 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 MSGN1A6NI15 193 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 RGS13O14921 159 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 NXPH3O95157 252 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 IFNA17P01571 189 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 IGLV2-23P01705 113 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 PF4V1P10720 104 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 OR2B8PP59922 312 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 IGHV3-72A0A0B4J1Y9 119 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 MOSP00540 346 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 PAX9P55771 341 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 RPL8P62917 257 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 HES1Q14469 280 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 STX12Q86Y82 276 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 OR2T10Q8NGZ9 312 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
SCAMP4-204ENST00000414057 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM50AO95807 157 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 SNRNP70P08621 437 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM11P17152 192 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 MAS1LP35410 378 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 EIF5AP63241 154 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 EWSR1Q01844 656 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■■■□□ 17.5
SCAMP4-204ENST00000414057 EBI3Q14213 229 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 OR51B2Q9Y5P1 312 aa13.34□□□□□ -0.27
SCAMP4-204ENST00000414057 AMY1AP04745 511 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 CD33P20138 364 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 SULT1A1P50225 295 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 IFITM2Q01629 132 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 COMMD5Q9GZQ3 224 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 ENY2Q9NPA8 101 aa13.33□□□□□ -0.28
SCAMP4-204ENST00000414057 A0A1W2PRX2 142 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 FGF16O43320 207 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 SLC25A17O43808 307 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 IFNA7P01567 189 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 IGKV1D-33P01593 117 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 IGKV1-33P01594 117 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 PF4P02776 101 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 CRYGBP07316 175 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 IAPPP10997 89 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 PRCDQ00LT1 54 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 PSG5Q15238 335 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 OXLD1Q5BKU9 147 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 TEX261Q6UWH6 196 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 STPG2Q8N412 459 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 WFDC9Q8NEX5 89 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 NPBQ8NG41 125 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 STOML3Q8TAV4 291 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 ZNF471Q9BX82 626 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 U3KQ87 197 aa13.32□□□□□ -0.28
SCAMP4-204ENST00000414057 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 JTBO76095 146 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 HBG1P69891 147 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 HBG2P69892 147 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 OR8H1Q8NGG4 311 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 PHYHIPLQ96FC7 376 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 FBXL17Q9UF56 701 aa13.31□□□□□ -0.28
SCAMP4-204ENST00000414057 PSMB11A5LHX3 300 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 NBR2O15453 112 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 NDUFA3O95167 84 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 TMEM14EPQ6UXP3 125 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 PPP1R27Q86WC6 154 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 RITA1Q96K30 269 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 PLEKHA3Q9HB20 300 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 HEYLQ9NQ87 328 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 METTL1Q9UBP6 276 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 NOTCH1P46531 2555 aa13.3□□□□□ -0.28
SCAMP4-204ENST00000414057 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 TEX50A0A1B0GTY4 177 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 A0A1W2PN81 502 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 RRHO14718 337 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 CHRNA7P36544 502 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 F2RL1P55085 397 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms