RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CRYBB3P26998 211 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 CCL8P80075 99 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 SRSF6Q13247 344 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 RSPO4Q2I0M5 234 aaPredicted RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 CEACAM21Q3KPI0 293 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 PIGYQ3MUY2 71 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 LINC01590Q5TEZ4 76 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 GREB1Q4ZG55 1949 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 J3QW42 95 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 TRAV5A0A0B4J249 113 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 CSRP1P21291 193 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 KIR2DS2P43631 304 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 BVES-AS1Q5T3Y7 98 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 PDCD11Q14690 1871 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 FAM90A26D6RGX4 464 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 F8W1H4 67 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 ANOS1P23352 680 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 UNC119Q13432 240 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 PAQR4Q8N4S7 273 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 ZNF414Q96IQ9 312 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SRXN1Q9BYN0 137 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 CHCHD2Q9Y6H1 151 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SCN8AQ9UQD0 1980 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 IZUMO1RA6ND01 250 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 RPL31P62899 125 aaKnown RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SLC35E4Q6ICL7 350 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 IMMP1LQ96LU5 166 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SIGLEC12Q96PQ1 595 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 A0A1B0GUS0 222 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 TMEM189A5PLL7 270 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 DLL1O00548 723 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 PSG2P11465 335 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SUPT4H1P63272 117 aaKnown RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 ASCL5Q7RTU5 278 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 CLEC7AQ9BXN2 247 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 AKAP6Q13023 2319 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 SYNGR1O43759 233 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 LMX1BO60663 402 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 RFPL3SP0C7P2 107 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 ARL14EPLP0DKL9 152 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 COL8A1P27658 744 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 GPR6P46095 362 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-209ENST00000412587 HBBP68871 147 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 ZNF488Q96MN9 340 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 LHFPL6Q9Y693 200 aa7.19□□□□□ -1.26
PBRM1-209ENST00000412587 COL6A6A6NMZ7 2263 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 CENPWQ5EE01 88 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 SSMEM1Q8WWF3 244 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
PBRM1-209ENST00000412587 IGLV3-12A0A075B6K2 115 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 IGHV3OR15-7A0A075B7D8 119 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 FAM157AC9JC47 383 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 ZNHIT1O43257 154 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 TIMP3P35625 211 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 OPRK1P41145 380 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 EGR4Q05215 589 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 TCTEX1D4Q5JR98 221 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 C18orf12Q96KH6 178 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 SLC25A33Q9BSK2 321 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 hDV102S1A0JD36 115 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 RPL7P18124 248 aaKnown RBP7.18□□□□□ -1.26
PBRM1-209ENST00000412587 ASCL4Q6XD76 172 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 LINC00596Q86U02 117 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 SCNM1Q9BWG6 230 aa7.18□□□□□ -1.26
PBRM1-209ENST00000412587 NPIPB13A6NJU9 1138 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 A8MWV9 139 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 NPIPB4C9JG80 1138 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 RBP4P02753 201 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 PRDX2P32119 198 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 HERVK_113P61574 105 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 KLRB1Q12918 225 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 C5orf24Q7Z6I8 188 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 ZNF525Q8N782 197 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 NDFIP1Q9BT67 221 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 SFXN3Q9BWM7 321 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 A0A1W2PS18 150 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 REG1AP05451 166 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 ATP5G3P48201 142 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 MFAP4P55083 255 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 FOXA3P55318 350 aaPredicted RBP7.17□□□□□ -1.26
PBRM1-209ENST00000412587 YPEL3P61236 119 aaPredicted RBP7.17□□□□□ -1.26
PBRM1-209ENST00000412587 ZFP36L1Q07352 338 aaKnown RBP7.17□□□□□ -1.26
PBRM1-209ENST00000412587 CHD3Q12873 2000 aaKnown RBP7.17□□□□□ -1.26
PBRM1-209ENST00000412587 LRTM2Q8N967 370 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 FLVCR1-AS1Q8TAF5 88 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 OR5P3Q8WZ94 311 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 HSD17B10Q99714 261 aaKnown RBP7.17□□□□□ -1.26
PBRM1-209ENST00000412587 THSD7BQ9C0I4 1608 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 OR2J3O76001 311 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
PBRM1-209ENST00000412587 SAXO1Q8IYX7 474 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms