RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ATP5G2Q06055 141 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 OR2C3Q8N628 320 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 SLC35G3Q8N808 338 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 GPR146Q96CH1 333 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 RRNAD1Q96FB5 475 aaKnown RBP10.11□□□□□ -0.79
HDAC8-210ENST00000412342 CCDC140Q96MF4 163 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
HDAC8-210ENST00000412342 PEF1Q9UBV8 284 aaKnown RBP10.11□□□□□ -0.79
HDAC8-210ENST00000412342 KCNIP3Q9Y2W7 256 aa10.11□□□□□ -0.79
HDAC8-210ENST00000412342 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
HDAC8-210ENST00000412342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.1□□□□□ -0.79
HDAC8-210ENST00000412342 A0A0B4J2A0 478 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 MFSD2BA6NFX1 497 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 BMPR1BO00238 502 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 DEFA6Q01524 100 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 EGFEM1PQ0D2K5 195 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 ANKRD55Q3KP44 614 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 PDLIM3Q53GG5 364 aaPredicted RBP10.1□□□□□ -0.79
HDAC8-210ENST00000412342 NMSQ5H8A3 153 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 CENPSQ8N2Z9 138 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 LRTM2Q8N967 370 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 ZNF114Q8NC26 417 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 SHPKQ9UHJ6 478 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 FLVCR2Q9UPI3 526 aa10.1□□□□□ -0.79
HDAC8-210ENST00000412342 OVOL1O14753 267 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 LYRM1O43325 122 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 SFT2D2O95562 160 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 DEFA4P12838 97 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 KRTAP10-11P60412 298 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 UBE2MP61081 183 aaKnown RBP10.09□□□□□ -0.79
HDAC8-210ENST00000412342 SRPXP78539 464 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 SPINK9Q5DT21 86 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 LYZL2Q7Z4W2 148 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 PLEKHA3Q9HB20 300 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 CACNG5Q9UF02 275 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 TBC1D24Q9ULP9 559 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 S4R3C0 116 aa10.09□□□□□ -0.79
HDAC8-210ENST00000412342 CENPXA8MT69 81 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 SEC14L6B5MCN3 397 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 K7EIM0 57 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 ANXA3P12429 323 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 ZP3P21754 424 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 MECP2P51608 486 aaKnown RBP10.08□□□□□ -0.8
HDAC8-210ENST00000412342 IFITM3Q01628 133 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 KLF5Q13887 457 aaPredicted RBP10.08□□□□□ -0.8
HDAC8-210ENST00000412342 LGI3Q8N145 548 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 OR1P1Q8NH06 330 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 OR52E5Q8NH55 327 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 RNASE11Q8TAA1 199 aaKnown RBP10.08□□□□□ -0.8
HDAC8-210ENST00000412342 ZNF502Q8TBZ5 544 aa10.08□□□□□ -0.8
HDAC8-210ENST00000412342 WDR12Q9GZL7 423 aaKnown RBP10.08□□□□□ -0.8
HDAC8-210ENST00000412342 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
HDAC8-210ENST00000412342 DUXBA0A1W2PPF3 345 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 PPP5D1E7EU14 171 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
HDAC8-210ENST00000412342 VAMP1P23763 118 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 ZNF846Q147U1 533 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 BSXQ3C1V8 233 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 FAM209BQ5JX69 171 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 SLC25A24Q6NUK1 477 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 ACSM6Q6P461 480 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 VN1R17PQ8TDU5 208 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
HDAC8-210ENST00000412342 C9orf170A2RU37 121 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 PITX3O75364 302 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 UPK1BO75841 260 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 IFNA17P01571 189 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-210ENST00000412342 SULT1A3P0DMM9 295 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 SULT1A4P0DMN0 295 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 RNASE2P10153 161 aaKnown RBP10.06□□□□□ -0.8
HDAC8-210ENST00000412342 ANXA7P20073 488 aaKnown RBP10.06□□□□□ -0.8
HDAC8-210ENST00000412342 SPCS3P61009 180 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 DHRS2Q13268 280 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 ASAH1Q13510 395 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 CLEC19AQ6UXS0 136 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 IL34Q6ZMJ4 242 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 SCARB1Q8WTV0 552 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 ZNF414Q96IQ9 312 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 C20orf85Q9H1P6 137 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 AURKAIP1Q9NWT8 199 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-210ENST00000412342 THYN1Q9P016 225 aa10.06□□□□□ -0.8
HDAC8-210ENST00000412342 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 I3L2K1 104 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 CYB5BO43169 146 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 HLA-AP01891 365 aaKnown RBP10.05□□□□□ -0.8
HDAC8-210ENST00000412342 TCRBP04435 133 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 OR4E1P0C645 316 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 ERHP84090 104 aaKnown RBP10.05□□□□□ -0.8
HDAC8-210ENST00000412342 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
HDAC8-210ENST00000412342 C11orf87Q6NUJ2 197 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms