RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 POU2AF1Q16633 256 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 SFTA2Q6UW10 78 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 FGF11Q92914 225 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 ZNF71Q9NQZ8 489 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-203ENST00000412145 TRPM3Q9HCF6 1732 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV1-69-2A0A0G2JMI3 117 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 PRR32B1ATL7 298 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 ESDP10768 282 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 RIPPLY3P57055 190 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 SPATA31B1PQ5VZV4 182 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 RNF5Q99942 180 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 FBLN5Q9UBX5 448 aa6.27□□□□□ -1.41
PTPN3-203ENST00000412145 OOSP1A8MZH6 123 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 M0R381 172 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 DSCR9P59020 149 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 GTSCR1Q86UQ5 136 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 TMEM14DPA8MWL7 114 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 LILRA1O75019 489 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 SRSF2Q01130 221 aaKnown RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 COQ2Q96H96 371 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 HILPDAQ9Y5L2 63 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV5-10-1A0A0J9YXX1 117 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 TMEM8BA6NDV4 472 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 C1QAP02745 245 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 OR9G9P0C7N8 305 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 APOBEC3AP31941 199 aaPredicted RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 PRSS12P56730 875 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 ICAM4Q14773 271 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 KLF17Q5JT82 389 aaPredicted RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 DCAF12L2Q5VW00 463 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 MRPL27Q9P0M9 148 aaKnown RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 DOCK9Q9BZ29 2069 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 GFRA3O60609 400 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 CD28P10747 220 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 ZP1P60852 638 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 FOXL1Q12952 345 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 Q9H3A6 140 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 SPTBP11277 2137 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 ITGB1BP1O14713 200 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 CT62P0C5K7 136 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 IGFBP3P17936 291 aaPredicted RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 Q6ZT83 130 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 ZG16O60844 167 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 CCL3P10147 92 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 LINC01587Q99440 93 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 PILRBQ9UKJ0 227 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 MRPS18CQ9Y3D5 142 aaKnown RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 RBBP6Q7Z6E9 1792 aaKnown RBP6.26□□□□□ -1.41
PTPN3-203ENST00000412145 NHSL1Q5SYE7 1610 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 TNFSF13O75888 250 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 PMS2CLQ68D20 193 aa6.26□□□□□ -1.41
PTPN3-203ENST00000412145 RGPD3A6NKT7 1758 aaPredicted RBP6.25□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV3OR15-7A0A075B7D8 119 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 C15orf61A6NNL5 157 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 REG1BP48304 166 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 OR13A1Q8NGR1 328 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 PRR7Q8TB68 274 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 MEGF9Q9H1U4 602 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 TRBV24-1A0A075B6N3 115 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 PDE6HQ13956 83 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 ITLN1Q8WWA0 313 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 NPIPB3Q92617 1050 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV3OR16-12A0A075B7B8 117 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 ATXN7O15265 892 aaPredicted RBP6.25□□□□□ -1.41
PTPN3-203ENST00000412145 SCTP09683 121 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 LINC00271P0C7V0 271 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 LILRA6Q6PI73 481 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 SPSB3Q6PJ21 355 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 KLHDC2Q9Y2U9 406 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 IGLV1-36A0A0B4J1U3 117 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 MEX3AA1L020 520 aaKnown RBP6.25□□□□□ -1.41
PTPN3-203ENST00000412145 TFPI2P48307 235 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 ATP5J2P56134 94 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 PPP1R27Q86WC6 154 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 GFRA4Q9GZZ7 299 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 MCM3APO60318 1980 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 ZNF205O95201 554 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 IGHV4-39P01824 125 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 C1QL3Q5VWW1 255 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 TOMM7Q9P0U1 55 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 TDRD6O60522 2096 aaKnown RBP6.25□□□□□ -1.41
PTPN3-203ENST00000412145 LRP5O75197 1615 aa6.25□□□□□ -1.41
PTPN3-203ENST00000412145 NDUFA3O95167 84 aa6.24□□□□□ -1.41
PTPN3-203ENST00000412145 ZNF708P17019 499 aa6.24□□□□□ -1.41
PTPN3-203ENST00000412145 NANOS3P60323 173 aaKnown RBP6.24□□□□□ -1.41
PTPN3-203ENST00000412145 KLF14Q8TD94 323 aaPredicted RBP6.24□□□□□ -1.41
PTPN3-203ENST00000412145 GGTLC1Q9BX51 225 aa6.24□□□□□ -1.41
PTPN3-203ENST00000412145 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
PTPN3-203ENST00000412145 A0A1B0GTL3 188 aa6.24□□□□□ -1.41
PTPN3-203ENST00000412145 ADARB2-AS1A8MUL3 147 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms