RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NDUFA4L2Q9NRX3 87 aa-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 NHP2Q9NX24 153 aaKnown RBP-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 AATFQ9NY61 560 aaKnown RBP eCLIP-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 NINJ2Q9NZG7 142 aa-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 ZNF706Q9Y5V0 76 aaPredicted RBP-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAB3GAP2Q9H2M9 1393 aa-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 AKNAQ7Z591 1439 aa-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 ZMYM4Q5VZL5 1548 aa-2.53□□□□□ -2.81
RNU4-88P-201ENST00000411220 A0A0A6YYD5 115 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 TRAV26-2A0A0B4J265 109 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 PQLC2LA1A4F0 135 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 TMEM189A5PLL7 270 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 H0Y980 276 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 CDC42EP2O14613 210 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 AZIN1O14977 448 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 PRPF3O43395 683 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 HCRTR2O43614 444 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 MFSD11O43934 449 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 ADAP1O75689 374 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 STK16O75716 305 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 FADS2O95864 444 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 TFF1P04155 84 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 RALAP11233 206 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 RALBP11234 206 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 PCMT1P22061 227 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR1D2P34982 312 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 GPX4P36969 197 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 HNMTP50135 292 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 STC1P52823 247 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 FXYD7P58549 80 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 FKBP1BP68106 108 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 PRDX1Q06830 199 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 SPHARQ15513 63 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 SSX7Q7RTT5 188 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 EFL1Q7Z2Z2 1120 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 C5orf38Q86SI9 138 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR8I2Q8N0Y5 310 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 CENPSQ8N2Z9 138 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 FADS6Q8N9I5 356 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR2M3Q8NG83 312 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR4B1Q8NGF8 309 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR13C8Q8NGS7 320 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 TSEN15Q8WW01 171 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 STMN2Q93045 179 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 MCUR1Q96AQ8 359 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 ERP27Q96DN0 273 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 IQCDQ96DY2 449 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 GNPNAT1Q96EK6 184 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 REEP6Q96HR9 211 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 DIRAS2Q96HU8 199 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 YPEL4Q96NS1 127 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 OPALINQ96PE5 141 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 CYTH2Q99418 400 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 SEPHS2Q99611 448 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 EMC6Q9BV81 110 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 C6orf62Q9GZU0 229 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 PRKRIP1Q9H875 184 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 C14orf132Q9NPU4 83 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 HOMER3Q9NSC5 361 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 NUDT15Q9NV35 164 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 GOLGA6AQ9NYA3 693 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 CKLFQ9UBR5 152 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 C19orf53Q9UNZ5 99 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 POMPQ9Y244 141 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 FAM50BQ9Y247 325 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 POLR3AO14802 1390 aaPredicted RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 RIC1Q4ADV7 1423 aa-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 XRN1Q8IZH2 1706 aaKnown RBP-2.54□□□□□ -2.82
RNU4-88P-201ENST00000411220 TRAV3A0A0B4J244 114 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 IGHV2-70DA0A0C4DH43 119 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1B0GTQ1 180 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1W2PQF6 199 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 DISP2A7MBM2 1401 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 M0R036 132 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 APOL1O14791 398 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 PSPHP1O15172 72 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 PMM2O15305 246 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 TPPPO94811 219 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR2A4O95047 310 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 NSA2O95478 260 aaKnown RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 MBD3O95983 291 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 HBQ1P09105 142 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 H2AFXP16104 143 aaPredicted RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 IL12AP29459 219 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 FGF9P31371 208 aaPredicted RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 EIF2B2P49770 351 aaKnown RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 SULT1A1P50225 295 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 ACLYP53396 1101 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 ATXN3P54252 364 aaPredicted RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 TBPL1P62380 186 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 SUPT4H1P63272 117 aaKnown RBP-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 MXD1Q05195 221 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 C2orf80Q0P641 193 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 NUP160Q12769 1436 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 CETN1Q12798 172 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 ARHGAP19Q14CB8 494 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 SSX1Q16384 188 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 ANKRD20A4Q4UJ75 823 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 HSP90AA5PQ58FG0 334 aa-2.55□□□□□ -2.82
RNU4-88P-201ENST00000411220 ANKRD20A2Q5SQ80 823 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms