RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 KCNIP3Q9Y2W7 256 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 SORL1Q92673 2214 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 TRBV7-1A0A0A6YYK4 115 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 A0A0B4J293 547 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 ZNF57Q68EA5 555 aaPredicted RBP15.88■□□□□ 0.13
VSX1-204ENST00000409958 SLC25A24Q6NUK1 477 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 FAM219AQ8IW50 185 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 OR1L6Q8NGR2 347 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 RNASE11Q8TAA1 199 aaKnown RBP15.88■□□□□ 0.13
VSX1-204ENST00000409958 LHFPL5Q8TAF8 219 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 TGP01266 2768 aa15.88■□□□□ 0.13
VSX1-204ENST00000409958 MFSD2BA6NFX1 497 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 GGCTO75223 188 aaKnown RBP15.87■□□□□ 0.13
VSX1-204ENST00000409958 IGHV3-23P01764 117 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 BAK1Q16611 211 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 SELENOHQ8IZQ5 122 aaKnown RBP15.87■□□□□ 0.13
VSX1-204ENST00000409958 OR2C3Q8N628 320 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 VN1R17PQ8TDU5 208 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 SLC25A21Q9BQT8 299 aaPredicted RBP15.87■□□□□ 0.13
VSX1-204ENST00000409958 S4R3C0 116 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 TMEM56-RWDD3S4R434 201 aa15.87■□□□□ 0.13
VSX1-204ENST00000409958 A0A0G2JRQ6 117 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 PPP5D1E7EU14 171 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 AKR1C4P17516 323 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 INPP1P49441 399 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 MFAP2P55001 183 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 TRIQKQ629K1 86 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 CLEC19AQ6UXS0 136 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 OR1P1Q8NH06 330 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 ZNF502Q8TBZ5 544 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 IL22RA2Q969J5 263 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 SDHCQ99643 169 aaPredicted RBP15.86■□□□□ 0.13
VSX1-204ENST00000409958 PLEKHA3Q9HB20 300 aa15.86■□□□□ 0.13
VSX1-204ENST00000409958 ST8SIA3O43173 380 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 ARL3P36405 182 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 ERHP84090 104 aaKnown RBP15.85■□□□□ 0.13
VSX1-204ENST00000409958 TMEM187Q14656 261 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 TMEM268Q5VZI3 342 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 IL34Q6ZMJ4 242 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 ZNF114Q8NC26 417 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 PDCD10Q9BUL8 212 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 PEMTQ9UBM1 199 aa15.85■□□□□ 0.13
VSX1-204ENST00000409958 ZNF256Q9Y2P7 627 aaPredicted RBP15.85■□□□□ 0.13
VSX1-204ENST00000409958 INS-IGF2F8WCM5 200 aa15.84■□□□□ 0.13
VSX1-204ENST00000409958 IFNA17P01571 189 aa15.84■□□□□ 0.13
VSX1-204ENST00000409958 CLEC3BP05452 202 aa15.84■□□□□ 0.13
VSX1-204ENST00000409958 SUPT4H1P63272 117 aaKnown RBP15.84■□□□□ 0.13
VSX1-204ENST00000409958 Q6ZRM9 215 aa15.84■□□□□ 0.13
VSX1-204ENST00000409958 SIGLEC8Q9NYZ4 499 aa15.84■□□□□ 0.13
VSX1-204ENST00000409958 NAP1L6A6NFF2 107 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 A6NHS1 94 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 OR2C1O95371 312 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 HLA-AP01891 365 aaKnown RBP15.83■□□□□ 0.12
VSX1-204ENST00000409958 ANXA3P12429 323 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 DCTN2Q13561 401 aaKnown RBP15.83■□□□□ 0.12
VSX1-204ENST00000409958 AARDQ4LEZ3 155 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 TMEM128Q5BJH2 165 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 TMED4Q7Z7H5 227 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 GPHB5Q86YW7 130 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 SLC35G3Q8N808 338 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 PRR25Q96S07 402 aa15.83■□□□□ 0.12
VSX1-204ENST00000409958 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.83■□□□□ 0.12
VSX1-204ENST00000409958 IGLV1-51P01701 117 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 CSN3P07498 182 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 SRPXP78539 464 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 SPINK9Q5DT21 86 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 DEFB121Q5J5C9 76 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 GPR146Q96CH1 333 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 ATP6V0BQ99437 205 aa15.82■□□□□ 0.12
VSX1-204ENST00000409958 K7EIM0 57 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 LGALS9O00182 355 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 SPNP16150 400 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 GPR183P32249 361 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 SPCS3P61009 180 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 RBMS2Q15434 407 aaKnown RBP15.81■□□□□ 0.12
VSX1-204ENST00000409958 LINC00299Q6ZSB3 139 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 LGI3Q8N145 548 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 OR52E5Q8NH55 327 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 SCARB1Q8WTV0 552 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 C21orf62Q9NYP8 219 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 PRR13Q9NZ81 148 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 CACNG5Q9UF02 275 aa15.81■□□□□ 0.12
VSX1-204ENST00000409958 A0A0B4J2A0 478 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 PIGBOS1A0A0B4J2F0 54 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 LY86O95711 162 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 IL7P13232 177 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 FAM106AQ4KMX7 169 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 C7orf50Q9BRJ6 194 aaKnown RBP15.8■□□□□ 0.12
VSX1-204ENST00000409958 ENY2Q9NPA8 101 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 SHPKQ9UHJ6 478 aa15.8■□□□□ 0.12
VSX1-204ENST00000409958 IGHV3-21A0A0B4J1V1 117 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 TGOLN2O43493 480 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 SNCAP37840 140 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 HOXA1P49639 335 aaPredicted RBP15.79■□□□□ 0.12
VSX1-204ENST00000409958 CCR6P51684 374 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 PLET1Q6UQ28 207 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 HAPLN4Q86UW8 402 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 MISP3Q96FF7 219 aa15.79■□□□□ 0.12
VSX1-204ENST00000409958 BSCL2Q96G97 398 aaPredicted RBP15.79■□□□□ 0.12
VSX1-204ENST00000409958 CACFD1Q9UGQ2 172 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms