RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PRB3Q04118 309 aaPredicted RBP16.24■□□□□ 0.19
USP39-204ENST00000409766 VMA21Q3ZAQ7 101 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 LY6G5BQ8NDX9 201 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 ABHD5Q8WTS1 349 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 SPTBN1Q01082 2364 aaKnown RBP16.24■□□□□ 0.19
USP39-204ENST00000409766 IGKV1OR2-108A0A075B7D4 117 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 IGHV3-72A0A0B4J1Y9 119 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 A0A1W2PN81 502 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 BUB1B-PAK6H3BSN5 160 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 SLC25A17O43808 307 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 AGAP20933 346 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 CHRNA7P36544 502 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 GAMTQ14353 236 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 MRGPRG-AS1Q2M3A8 158 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 CYP2G1PQ6ZSU1 146 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 C2CD4CQ8TF44 421 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 NEU4Q8WWR8 484 aaPredicted RBP16.24■□□□□ 0.19
USP39-204ENST00000409766 MALSU1Q96EH3 234 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 NAT8Q9UHE5 227 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 PKD1L2Q7Z442 2459 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 C1orf196B1AJZ1 125 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 LINC00869P0C866 280 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 ARL14EPLP0DKL9 152 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 RAB5BP61020 215 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 WT1-ASQ06250 92 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 C10orf55Q5SWW7 151 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 RPUSD4Q96CM3 377 aaKnown RBP16.23■□□□□ 0.19
USP39-204ENST00000409766 TIMD4Q96H15 378 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 PARLQ9H300 379 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 SAV1Q9H4B6 383 aaPredicted RBP16.23■□□□□ 0.19
USP39-204ENST00000409766 TPSG1Q9NRR2 321 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 SLC45A2Q9UMX9 530 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 C11orf94C9JXX5 98 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 ENSAO43768 121 aaKnown RBP16.23■□□□□ 0.19
USP39-204ENST00000409766 CD69Q07108 199 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 ELOBQ15370 118 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 MLANAQ16655 118 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 ZNF674Q2M3X9 581 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 SPNS3Q6ZMD2 512 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 DTX2Q86UW9 622 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 SEPSECSQ9HD40 501 aaKnown RBP16.23■□□□□ 0.19
USP39-204ENST00000409766 TMEM242Q9NWH2 141 aa16.23■□□□□ 0.19
USP39-204ENST00000409766 C22orf46C9J442 243 aa16.22■□□□□ 0.19
USP39-204ENST00000409766 CXorf1O96002 111 aa16.22■□□□□ 0.19
USP39-204ENST00000409766 TMEM241Q24JQ0 296 aa16.22■□□□□ 0.19
USP39-204ENST00000409766 ZNF343Q6P1L6 599 aa16.22■□□□□ 0.19
USP39-204ENST00000409766 OR4P4Q8NGL7 312 aa16.22■□□□□ 0.19
USP39-204ENST00000409766 IGHV1-3A0A0C4DH29 117 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 A0A1W2PPR1 153 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 LIPFP07098 398 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 RHOBP62745 196 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 CACNG8Q8WXS5 425 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 BIN3Q9NQY0 253 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 INSIG2Q9Y5U4 225 aa16.21■□□□□ 0.19
USP39-204ENST00000409766 NPPCP23582 126 aa16.21■□□□□ 0.18
USP39-204ENST00000409766 COX7A1P24310 79 aa16.21■□□□□ 0.18
USP39-204ENST00000409766 TEX45Q8NA69 505 aa16.21■□□□□ 0.18
USP39-204ENST00000409766 Q8WTZ3 238 aa16.21■□□□□ 0.18
USP39-204ENST00000409766 NAV3Q8IVL0 2385 aa16.2■□□□□ 0.18
USP39-204ENST00000409766 GPX4P36969 197 aaPredicted RBP16.2■□□□□ 0.18
USP39-204ENST00000409766 UBE2G2P60604 165 aa16.2■□□□□ 0.18
USP39-204ENST00000409766 SPATA31B1PQ5VZV4 182 aa16.2■□□□□ 0.18
USP39-204ENST00000409766 ONECUT1Q9UBC0 465 aa16.2■□□□□ 0.18
USP39-204ENST00000409766 PLXNB1O43157 2135 aa16.2■□□□□ 0.18
USP39-204ENST00000409766 LY6LH3BQJ8 138 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 PDE6DO43924 150 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 CRYGBP07316 175 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 CHODLQ9H9P2 273 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 URGCP-MRPS24S4R325 110 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 ATP5G3P48201 142 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 C4orf17Q53FE4 359 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 CST9LP1Q5W188 147 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 SLC16A13Q7RTY0 426 aa16.19■□□□□ 0.18
USP39-204ENST00000409766 ITLN2Q8WWU7 325 aaPredicted RBP16.19■□□□□ 0.18
USP39-204ENST00000409766 AMMECR1Q9Y4X0 333 aaPredicted RBP16.19■□□□□ 0.18
USP39-204ENST00000409766 KLF2Q9Y5W3 355 aaPredicted RBP16.19■□□□□ 0.18
USP39-204ENST00000409766 A0A1W2PPI3 338 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 CLDN34H7C241 214 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 CXCL1P09341 107 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 OR10J1P30954 320 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 UQCRFS1P47985 274 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 RND2P52198 227 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 RPL23P62829 140 aaKnown RBP16.18■□□□□ 0.18
USP39-204ENST00000409766 ADIRFQ15847 76 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 C1QL4Q86Z23 238 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 PNKDQ8N490 385 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 OR51G1Q8NGK1 321 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 NANPQ8TBE9 248 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 RNASEH2CQ8TDP1 164 aaKnown RBP16.18■□□□□ 0.18
USP39-204ENST00000409766 ARHGAP32A7KAX9 2087 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 TSPAN9O75954 239 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 CNTFRP26992 372 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 GCHFRP30047 84 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 PRSS8Q16651 343 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 RPEQ96AT9 228 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 SLC35E1Q96K37 410 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 TXNDC17Q9BRA2 123 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 CTDSP1Q9GZU7 261 aa16.18■□□□□ 0.18
USP39-204ENST00000409766 SUB1P53999 127 aaKnown RBP eCLIP16.17■□□□□ 0.186e-9■■■□□ 18
USP39-204ENST00000409766 GNB1P62873 340 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms