RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PF4V1P10720 104 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 PROK1P58294 105 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 FGL1Q08830 312 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 RAB32Q13637 225 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 AWAT1Q58HT5 328 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 C9orf62Q8N4C0 152 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 WNT10AQ9GZT5 417 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 ENY2Q9NPA8 101 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 HEYLQ9NQ87 328 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 S4R3C0 116 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 SLC25A4P12235 298 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 PSMB6P28072 239 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 CRIP2P52943 208 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 CFHR3Q02985 330 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 AARDQ4LEZ3 155 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 AKIRIN2Q53H80 203 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 DTD1Q8TEA8 209 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 PAIP2BQ9ULR5 123 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 DMRT1Q9Y5R6 373 aa11.03□□□□□ -0.64
CHRNA1-204ENST00000409323 TMEM89A2RUT3 159 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 K7EPK0 472 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 SYNGR2O43760 224 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 FBXO24O75426 580 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 CD28P10747 220 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 DEFA4P12838 97 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 CTRB1P17538 263 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 MFAP2P55001 183 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 ID3Q02535 119 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 OR52E5Q8NH55 327 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 P2RX4Q99571 388 aa11.02□□□□□ -0.65
CHRNA1-204ENST00000409323 TRAV14DV4A0A0A6YYC5 116 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 TMEM50AO95807 157 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 LYL1P12980 280 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 FOXL1Q12952 345 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 TTC9CQ8N5M4 171 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 OR2C3Q8N628 320 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 PPP1R1CQ8WVI7 109 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 MDFIQ99750 246 aa11.01□□□□□ -0.65
CHRNA1-204ENST00000409323 A0A1W2PRX2 142 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 OR2J3O76001 311 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 IGHV3-23P01764 117 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 TPPP2P59282 170 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 SLC35B1P78383 322 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 ERHP84090 104 aaKnown RBP11□□□□□ -0.65
CHRNA1-204ENST00000409323 IFITM2Q01629 132 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 PDLIM3Q53GG5 364 aaPredicted RBP11□□□□□ -0.65
CHRNA1-204ENST00000409323 SLC25A24Q6NUK1 477 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 PINX1Q96BK5 328 aaKnown RBP11□□□□□ -0.65
CHRNA1-204ENST00000409323 MISP3Q96FF7 219 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 OR5B12Q96R08 314 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
CHRNA1-204ENST00000409323 NPIPB5A8MRT5 1133 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 IFNA10P01566 189 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 IGHG4P01861 327 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 TRGV3P03979 118 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 SNCAP37840 140 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 SPANXN5Q5MJ07 72 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 TEX38Q6PEX7 206 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 TMEM170AQ8WVE7 144 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 RNF126Q9BV68 326 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 GON7Q9BXV9 100 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 OR5AC2Q9NZP5 309 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 H0YIZ8 118 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 RGS13O14921 159 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 MED6O75586 246 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 MPC2O95563 127 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 CRYGCP07315 174 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 PSMB8P28062 276 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 PAX9P55771 341 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 RHOGP84095 191 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 MLANAQ16655 118 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 SLC24A4Q8NFF2 622 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 OR4C12Q96R67 309 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 PSENENQ9NZ42 101 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
CHRNA1-204ENST00000409323 NDUFB8O95169 186 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms