RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CLPSL1A2RUU4 121 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 H3BUA1 57 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 FBXO24O75426 580 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 IGLV1-40P01703 118 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 PET100P0DJ07 73 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 APELAP0DMC3 54 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 ATP5IP56385 69 aaPredicted RBP16.04■□□□□ 0.16
VSX1-203ENST00000409285 TAS2R30P59541 319 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 TMEM158Q8WZ71 300 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 WDR89Q96FK6 387 aaPredicted RBP16.04■□□□□ 0.16
VSX1-203ENST00000409285 C11orf1Q9H5F2 150 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 RANGRFQ9HD47 186 aaPredicted RBP16.04■□□□□ 0.16
VSX1-203ENST00000409285 HEYLQ9NQ87 328 aaPredicted RBP16.04■□□□□ 0.16
VSX1-203ENST00000409285 LINC00527Q9UJ94 153 aa16.04■□□□□ 0.16
VSX1-203ENST00000409285 SSSCA1O60232 199 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 IGHG4P01861 327 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 HTR2BP41595 481 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 SLC35B1P78383 322 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 CD300CQ08708 224 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 ST6GAL2Q96JF0 529 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 F11RQ9Y624 299 aaKnown RBP16.03■□□□□ 0.16
VSX1-203ENST00000409285 U3KQ87 197 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 SOX15O60248 233 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 DEDDO75618 318 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 MPC2O95563 127 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 PROK1P58294 105 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 FOXL1Q12952 345 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 PVRIGQ6DKI7 326 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 COMMD1Q8N668 190 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 SLC24A4Q8NFF2 622 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 OR1L6Q8NGR2 347 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 OR1P1Q8NH06 330 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 SMIM8Q96KF7 97 aa16.03■□□□□ 0.16
VSX1-203ENST00000409285 PSMB11A5LHX3 300 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 REG1AP05451 166 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 RNASE2P10153 161 aaKnown RBP16.02■□□□□ 0.15
VSX1-203ENST00000409285 PVALBP20472 110 aaPredicted RBP16.02■□□□□ 0.15
VSX1-203ENST00000409285 SNCAP37840 140 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 S100A10P60903 97 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 FGL1Q08830 312 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 KRTAP24-1Q3LI83 254 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 RNF152Q8N8N0 203 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 P2RX4Q99571 388 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 LSM5Q9Y4Y9 91 aaKnown RBP16.02■□□□□ 0.15
VSX1-203ENST00000409285 RNF114Q9Y508 228 aa16.02■□□□□ 0.15
VSX1-203ENST00000409285 TSC22D2O75157 780 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 TMEM50AO95807 157 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 MDKP21741 143 aaPredicted RBP16.01■□□□□ 0.15
VSX1-203ENST00000409285 PSMB8P28062 276 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 SUB1P53999 127 aaKnown RBP eCLIP16.01■□□□□ 0.15
VSX1-203ENST00000409285 PAX9P55771 341 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 LRRC37A5PQ49AS3 106 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 C2orf83Q53S99 150 aa16.01■□□□□ 0.15
VSX1-203ENST00000409285 TRBV9A0A0B4J1U6 114 aa16■□□□□ 0.15
VSX1-203ENST00000409285 CYB5BO43169 146 aa16■□□□□ 0.15
VSX1-203ENST00000409285 RLN2P04090 185 aa16■□□□□ 0.15
VSX1-203ENST00000409285 IAPPP10997 89 aa16■□□□□ 0.15
VSX1-203ENST00000409285 LYL1P12980 280 aa16■□□□□ 0.15
VSX1-203ENST00000409285 HIST1H1BP16401 226 aaKnown RBP16■□□□□ 0.15
VSX1-203ENST00000409285 FOXE3Q13461 319 aa16■□□□□ 0.15
VSX1-203ENST00000409285 PRSS54Q6PEW0 395 aa16■□□□□ 0.15
VSX1-203ENST00000409285 TEX38Q6PEX7 206 aa16■□□□□ 0.15
VSX1-203ENST00000409285 CENPVQ7Z7K6 275 aaPredicted RBP16■□□□□ 0.15
VSX1-203ENST00000409285 NOXA1Q86UR1 476 aa16■□□□□ 0.15
VSX1-203ENST00000409285 KLHDC1Q8N7A1 406 aa16■□□□□ 0.15
VSX1-203ENST00000409285 OR5T1Q8NG75 326 aa16■□□□□ 0.15
VSX1-203ENST00000409285 OR2T35Q8NGX2 323 aa16■□□□□ 0.15
VSX1-203ENST00000409285 SLA2Q9H6Q3 261 aa16■□□□□ 0.15
VSX1-203ENST00000409285 IGLV11-55A0A075B6I3 123 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 E5RGE8 158 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 H0YIZ8 118 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 ELANEP08246 267 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 NPY1RP25929 384 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 RPP30P78346 268 aaKnown RBP15.99■□□□□ 0.15
VSX1-203ENST00000409285 C11orf87Q6NUJ2 197 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 MDFIQ99750 246 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 DMRT1Q9Y5R6 373 aa15.99■□□□□ 0.15
VSX1-203ENST00000409285 TRAV14DV4A0A0A6YYC5 116 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 G3V3Q6 166 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 CORTO00230 105 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 DEFA4P12838 97 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 MFAP2P55001 183 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 RPL23AP62750 156 aaKnown RBP15.98■□□□□ 0.15
VSX1-203ENST00000409285 ZNF329Q86UD4 541 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 TCTE3Q8IZS6 198 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 MYOZ3Q8TDC0 251 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 TMEM170AQ8WVE7 144 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 FANCD2OSQ96PS1 177 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 RNF126Q9BV68 326 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 LYRM2Q9NU23 88 aaPredicted RBP15.98■□□□□ 0.15
VSX1-203ENST00000409285 OR5AC2Q9NZP5 309 aa15.98■□□□□ 0.15
VSX1-203ENST00000409285 C15orf62A8K5M9 175 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 L7N2F9 121 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 IFNA10P01566 189 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 VAMP2P63027 116 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 C19orf24Q9BVV8 132 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 PSENENQ9NZ42 101 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 THYN1Q9P016 225 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 STRAPQ9Y3F4 350 aaKnown RBP15.97■□□□□ 0.15
VSX1-203ENST00000409285 SMLR1H3BR10 107 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms