RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 OR11H12B2RN74 326 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 GABARAPH6UMI1 98 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 M0QYG6 137 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 CORTO00230 105 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 PIGPP57054 158 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 PRCDQ00LT1 54 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 WT1-ASQ06250 92 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 HAGHQ16775 308 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 Q56UQ5 140 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 TMEM229BQ8NBD8 167 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF114Q8NC26 417 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 RNASE11Q8TAA1 199 aaKnown RBP6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 SEC22AQ96IW7 307 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 TXN2Q99757 166 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 SPAG8Q99932 426 aaPredicted RBP6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF436Q9C0F3 470 aaPredicted RBP6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 SRD5A3Q9H8P0 318 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 PLEKHA3Q9HB20 300 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 CACFD1Q9UGQ2 172 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 S4R3C0 116 aa6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 KMT2CQ8NEZ4 4911 aaKnown RBP6.86□□□□□ -1.31
SNORD88A-201ENST00000408314 PIGBOS1A0A0B4J2F0 54 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 IZUMO1RA6ND01 250 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 OR2T8A6NH00 312 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 DISC1C4P0D8 188 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 K7EMT4 169 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 NUPL2O15504 423 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 RAB3DO95716 219 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 CD74P04233 296 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 CD3DP04234 171 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 CD5P06127 495 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 C8orf88P0DMB2 117 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 FCGR2BP31994 310 aaPredicted RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 SNCAP37840 140 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 PPP5CP53041 499 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 MFAP4P55083 255 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 HSPE1P61604 102 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 SURF2Q15527 256 aaPredicted RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 TRIM16LQ309B1 348 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 RNASE12Q5GAN4 147 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 STEAP1BQ6NZ63 245 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 BTNL8Q6UX41 500 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 OR2C3Q8N628 320 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 SLC35G3Q8N808 338 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 UBAC2Q8NBM4 344 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 OR52I2Q8NH67 350 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 TERB2Q8NHR7 220 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 SCARB1Q8WTV0 552 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 MRGPRFQ96AM1 343 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 RRNAD1Q96FB5 475 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 WDR89Q96FK6 387 aaPredicted RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 GINS3Q9BRX5 216 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 C5orf66Q9H5L9 145 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 ENY2Q9NPA8 101 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 KLK11Q9UBX7 282 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 C14orf166Q9Y224 244 aaKnown RBP6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 NSG2Q9Y328 171 aa6.85□□□□□ -1.31
SNORD88A-201ENST00000408314 HUWE1Q7Z6Z7 4374 aaKnown RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 C3orf85A0A1B0GTC6 90 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 C15orf62A8K5M9 175 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF785A8K8V0 405 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CD7P09564 240 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 NPBWR1P48145 328 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 ALDH3B2P48448 385 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 TMBIM6P55061 237 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 SCGB2B2Q4G0G5 96 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CLVS1Q8IUQ0 354 aaPredicted RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 FAM219AQ8IW50 185 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 SMIM4Q8WVI0 70 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 MISP3Q96FF7 219 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 PRRT1Q99946 306 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 C20orf24Q9BUV8 137 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 C6orf62Q9GZU0 229 aaPredicted RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 NAA50Q9GZZ1 169 aaKnown RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 MLXQ9UH92 298 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 RSL24D1Q9UHA3 163 aaKnown RBP6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
SNORD88A-201ENST00000408314 INS-IGF2F8WCM5 200 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 K7EIM0 57 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 TSPAN4O14817 238 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 CTDSPLO15194 276 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 GNG7O60262 68 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 IFNA17P01571 189 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 AKAIN1P0CW23 69 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 UCP1P25874 307 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 APOC4P55056 127 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 DHODHQ02127 395 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 IL18Q14116 193 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms