RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 A0A1W2PPM0 123 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 LYSMD4Q5XG99 296 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 NFAM1Q8NET5 270 aaPredicted RBP10.55□□□□□ -0.72
HERC3-203ENST00000407637 H1FXQ92522 213 aaKnown RBP10.55□□□□□ -0.72
HERC3-203ENST00000407637 TRIB1Q96RU8 372 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 WDR87Q6ZQQ6 2873 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
HERC3-203ENST00000407637 LOC102723996A0A087X1L8 192 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 FASLGP48023 281 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 NOGQ13253 232 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 CEACAM21Q3KPI0 293 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 Q6ZR03 302 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 FAM214BQ7L5A3 538 aa10.55□□□□□ -0.72
HERC3-203ENST00000407637 SPTY2D1-AS1A0A0U1RR47 76 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 SP9P0CG40 484 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 LRRC29Q8WV35 223 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 FBLL1A6NHQ2 334 aaKnown RBP10.54□□□□□ -0.72
HERC3-203ENST00000407637 A6NJY4 79 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 CCL2P13500 99 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 CATR1Q13166 79 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 SNRNP40Q96DI7 357 aaKnown RBP10.54□□□□□ -0.72
HERC3-203ENST00000407637 DUSP13Q9UII6 198 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 ZIC3O60481 467 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 ARL4DP49703 201 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 CCL7P80098 99 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 C1orf53Q5VUE5 145 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 TEX45Q8NA69 505 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 OR2Z1Q8NG97 314 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
HERC3-203ENST00000407637 MBD6Q96DN6 1003 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 OR2V2Q96R30 315 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 C1QTNF5Q9BXJ0 243 aa10.54□□□□□ -0.72
HERC3-203ENST00000407637 HEYLQ9NQ87 328 aaPredicted RBP10.54□□□□□ -0.72
HERC3-203ENST00000407637 HIGD1CA8MV81 97 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 ADH4P08319 380 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 MYF5P13349 255 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 TCTAP57738 103 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
HERC3-203ENST00000407637 FADS6Q8N9I5 356 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 CHCHD1Q96BP2 118 aaKnown RBP10.53□□□□□ -0.72
HERC3-203ENST00000407637 PLPPR2Q96GM1 343 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 FOXB1Q99853 325 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 SRXN1Q9BYN0 137 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
HERC3-203ENST00000407637 FREM1Q5H8C1 2179 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 A0A1B0GX78 115 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 VWC2LB2RUY7 222 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 FGF6P10767 208 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 ZNF138P52744 262 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 EIF4EBP1Q13541 118 aaPredicted RBP10.53□□□□□ -0.72
HERC3-203ENST00000407637 CEACAM16Q2WEN9 425 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 ZNF497Q6ZNH5 498 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 TMEM116Q8NCL8 245 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
HERC3-203ENST00000407637 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 Q6P435 159 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 LINC00696Q6ZRV3 163 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 MRPL21Q7Z2W9 205 aaKnown RBP10.52□□□□□ -0.73
HERC3-203ENST00000407637 ABHD12Q8N2K0 398 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 FAM216AQ8WUB2 273 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.73
HERC3-203ENST00000407637 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.73
HERC3-203ENST00000407637 PLEKHA3Q9HB20 300 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 SH2D2AQ9NP31 389 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 BRWD1Q9NSI6 2320 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 LINC00473A8K010 186 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 K7EQM0 130 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 WISP2O76076 250 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 FABP2P12104 132 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 TNFRSF4P43489 277 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
HERC3-203ENST00000407637 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 LILRA5A6NI73 299 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 LIPFP07098 398 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 IGFBP2P18065 325 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 ADAMTSL5Q6ZMM2 481 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 HSD17B10Q99714 261 aaKnown RBP10.51□□□□□ -0.73
HERC3-203ENST00000407637 PRDM14Q9GZV8 571 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 IDI2-AS1Q9NZ38 188 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 PTPRBP23467 1997 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 A0A0J9YW62 118 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 A0A1B0GXF2 115 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 IGHV4-34P06331 123 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 TEPPQ6URK8 271 aa10.51□□□□□ -0.73
HERC3-203ENST00000407637 POM121L2Q96KW2 1035 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms